Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1861 ATGCCAATTTCGAGGTTCCACATTCGGAGCGAGCACAGCTTGGCCGATCCGGAGCTCCACCGCGCCGCCGATAAGGATGATCCCGAGGCTCTCCTCGAAGCCGTCGCCATGGCTGGACTCGTCGGAGTCCTTCGCCAGCTCGGTGACCTTGCTCAGTTTGCTGCCGAGATCTTCCATGACTTGCATGAAGAAGTAATGGCCACTGCCGGGAGAGGCCACAGTCTTATTTCTCGTGTTCAGCAACTTGAAGCTGAAGTTCCTGCACTCGAGAAAGCTTTTTTGTCACAAACTCGTCATCATTCATTCTTTACAAATGGAGGGATTGAATGGCATCCTAATCTCCGATCTGAACAGAATCTTGTTACTCGTGGAGACTTGCCTCGATTTATAATGGATTCGTATGAAGAATGTCGTGCTCCCCCAAGGCTGTTCCTTCTAGACAAGTTTGATGTGGCTGGGGCTGGGGCATGTCTGAAGCGGTATACTGATCCATCATTCTTTAAAGTGGAGTCCTCTGTAACAACAGTAGAAGTTCACAGGGAAAAAAGGATTCATAAGGTCAAGCAGAAGAAAGTATCAAAACCAAGGAATGGTACAAAACCTGAAGTTGTCTCATCCCATGCCAAACTGCACCAGTTGTTCCTTGAGGAGCGCATTGAGAATGCTTGCAATGATCCTGCACGTCTTGTGAAGTTGAAGAAAAAACAGTTGAATGGATCGGCAGTAGATTCAAAGACTGGGAAAAGTTATATGGAGAAGATTTTTGAGAATTCCTCACCAGATCATAAAATGGTTTGTGAAGCCTCAATCACTCCACACCCACTGAAATCAATGTTTGATGCTGATGACAATGGGATTACAGTACTTGAAATCAGTAGTCTTAGCTCTGTGAAAAGGTCACCAGGATATGAAAGCAAAAGATCATCACCACTCAATGGGCAGGAATTAGAACTGAAACCATACTCTGAAATTGATAGGGTGAGGAATGGAGATTTTGTGCAAGTGCATGAAGATGTCTTAGGAGCCGTGACACATAAAACGCCTTTAAATCATCCCAAGGTACCTGATGAGAGACAATTGGTAGTTGATGAACAAAAGAACAGAGAATGCATCTTGGATGGTTACCATTCTGATGACGTGACTAGCGAGGTTGACGATTACATGGATGCCTTAGCTTCCATCGAAGAACTGGAAACAGAAATTGAGTGTAGACCAAAGAAAAGCTTATTCCATATTCAAAAGACAAGTGATTCAAATGGCAAAGAAGAACATCAACTGCAAGCTCAATTTTCAGATTCTCAATCATTTGGGGACTCCTTGACATCTGAAGAAATTGATTCAGTTGATCAAGATCGAAATGATGAATGTACCGAAGTGCAAGCTCAGCTGTCAGATTCTCAATCAACACGAAGCTCCAATGCATCAGATGATAGCAGATCATCCAGAAGAGTCAGAATTGCTGAACGCACCCAACTGAAAACTCCGTTTTCAGATTCTCAATCTATTGGAAACTCCTCCATATCAGAGATTGAATATATGCCATCCAACCAGCTTGACCAAAATGTTAAGTTGCAAAATACTCATTGTGGTGGGTTTGTCATGCATGACAAAGGACATGTTTATGGAGAAGATATCTCTGGTTTTGGACCAGATGCTTCTGTTTCATGTCTAATGGATTCAGGACATTCATTGTTATCTTTAGATCCTGGGCCCCTCTCCTCAATGTGCCTCCCTATAAGGACTCAATCTGGTGAAACACAATCTGGCCCTGTTGAAACTCATCAAAGCTTAGAAGATGATGAAGACAGGAAGTCACTTGTTGAATCTGTGATGAAAGATGATGCTTGCTCTATTGTTTCTTCCAATAACAAATCTCTGGATAGCTTGGATGTTTGTGATCCATGTGTTAGTTCCAATGCTTTAGAAGTTTTTAATGATTTGAACTTGGCACAGGAAGATGAATATGGTAATCATTCTGCAATAACAGTATTGCAGGAAGAATCTGCTAATAAATACTCTTCTGCAATTTCGGATTCCGGTGATATGGGTTTTCAAGGAGAGAATCCAATTTTCCCATCCATGAAAGCAGACTTGAATTTGGGTACCAAGTTGGCACTTGGCGGCAGAGACTTTAATTCTGAGAATGGTGTAAATGAAATCCAACACATCTCAGAGGATTTGTCTCCTGCTTTGGAGACTCCACAAATAAGTAACATTACAGAGGAACTATCGGATTTTACTCTAAATCAACAGGATGAGCCACATTCAGCAGAATCTGAAGTTTTCTGTTCTGAGCAGCAATCAACTTTTGAAGACATACAAAGGATGCTGCTTGCTGATGAAAAAGGTGGATCCAAAGTTGAAGATGATGTTCATATTAAATATCTGTCTTCTCTTGATAACAATAAGCAGGACAATCTTGTCTTTGTAAATGACGTGTCCACTGAAAAGGTTCATTCAGATCAGGCTTTTTCTGCTCTTCATTTGGTTGATAGTGCTGAAAATGGTGCAAGTTCTTTTAATTCTCTGTCCTCAGGTTTTGTTTCTTCCCCATCAAGGAATGCTTCAGATTTGAGTTCTTTTAGTTCCCATCGGAATGAAATAAAATACAATGAGGCCGATTTGACAAAAGTTTATGTAGGATTAAATTCAGAGAAGAGGGTAAATAAATTGGAATCGTCTTCAGACCTCATATCATCTCCAGCTAAAAGGCTTACAGATTTGGAAGAATCTACATTTGCAGATTCTCACGAGAAAGAAATGGAAGTCAATGAGGTACTTCCTCACAAATATTTGACAGCCTTAGTGGCACCAAGGGTGGTGGATCAACTTGAAATTGGTGCTGCTGACATACAATCAAATCCGAACAGATCTGTACCCTGTGATCCATGTCATTCTGAAATATGTAACAATATCCAAGAGGAGAGAATTCAAAATCTTTCTGCTGTCAGTGAAATGAAAGTGGTGGATTCAAGTTCAGAGCTAGACTCTGAGAGGTCAGAATCTGTATGTCTTTCTCAGAATGATGTACAGAACAACAAAGAGAGTTTGTCATCACCTTCCTTTAACCAGCTGAAGCCAGAAACACATTCAGAGATGTTCGTGGAATCACCGGTTAATCAACGGGATGCAGAAGTTCAGCTCAGAAATGATGGATACCATTCGCTTGAGAAATTTCAATTTCATCACCAATCTTCAAGTCAGTTGGAACAACTAAGAATCCATCCAGATGAACAGTCATCATTTGATTTCTCGTCTAAGTCATTTTTGCAGGAGACCAGTCCTACCAAGCATGTCATGCATTCATTGCATCCCCTGATTCCGGAGTTAACCAATAATCATGAGGAGATACCTCCTATGCCCCCTTTACCACCAATGCAGTGGAGAATGAGCAAGGTTCAACATTCTTCCCTAGTTTCACAGAGGGAAGAAATAGAAGCAACTCATGCATCATTGCAACCAATACAGCCAGTTAAACCTAATGATAAGTCTCAGTTTGGTTTATCAACCTCTGATAGAGACACTATACTGTATCAAAATCCATTTTTGCCTGTCATGGCTGTGGAAAGCAGTAAACTCCAGCGTTCTCCTGGGTTCTTAGCTGGTTTACCAGAGCATTCAGTTGCTATTCCCTTGCAATTTCCTATCATGATAAATAAATCAAATAGTCAATATAATTACCTGGTTATGGATAAAAGCCAACATCAGAACTCATTTTTAACACTACCTGTGGTCAAGGATGAATCTGGAGAATCGCATTTGATGCCACCTACTGAACTTGCTGCTTCTGGAAATGATCTCACCTCAGCAAGAGAACATATCACCCCAAGACAATTAACAGAAGAGACTAGTAGCTTAGAAGTTAAAACATTTGAGCAGTCTTCGATTTACTCAGAAAGGAAACAGGGAGATCCCTCTATCTCACCAATGGCACCACCAGGCATAGAAGTTGGGCAGCCCAATGACAGTCTGTTGCCTTCAAAGGGGGGAACGGCATCGCCATTGGATAAATCTTCCCGAACACCAGAGTTTGATAATAAAATGCCAAATGGAAAGCCGAAGAATAAGATTGTTCGTCCTGAGAGTCCTATAATTGATATTGCTGCTGCTCTTGACAGAAGCAAGGTAATGACAGTTTATAGGTTCTAA 4149 0.4126 MPISRFHIRSEHSLADPELHRAADKDDPEALLEAVAMAGLVGVLRQLGDLAQFAAEIFHDLHEEVMATAGRGHSLISRVQQLEAEVPALEKAFLSQTRHHSFFTNGGIEWHPNLRSEQNLVTRGDLPRFIMDSYEECRAPPRLFLLDKFDVAGAGACLKRYTDPSFFKVESSVTTVEVHREKRIHKVKQKKVSKPRNGTKPEVVSSHAKLHQLFLEERIENACNDPARLVKLKKKQLNGSAVDSKTGKSYMEKIFENSSPDHKMVCEASITPHPLKSMFDADDNGITVLEISSLSSVKRSPGYESKRSSPLNGQELELKPYSEIDRVRNGDFVQVHEDVLGAVTHKTPLNHPKVPDERQLVVDEQKNRECILDGYHSDDVTSEVDDYMDALASIEELETEIECRPKKSLFHIQKTSDSNGKEEHQLQAQFSDSQSFGDSLTSEEIDSVDQDRNDECTEVQAQLSDSQSTRSSNASDDSRSSRRVRIAERTQLKTPFSDSQSIGNSSISEIEYMPSNQLDQNVKLQNTHCGGFVMHDKGHVYGEDISGFGPDASVSCLMDSGHSLLSLDPGPLSSMCLPIRTQSGETQSGPVETHQSLEDDEDRKSLVESVMKDDACSIVSSNNKSLDSLDVCDPCVSSNALEVFNDLNLAQEDEYGNHSAITVLQEESANKYSSAISDSGDMGFQGENPIFPSMKADLNLGTKLALGGRDFNSENGVNEIQHISEDLSPALETPQISNITEELSDFTLNQQDEPHSAESEVFCSEQQSTFEDIQRMLLADEKGGSKVEDDVHIKYLSSLDNNKQDNLVFVNDVSTEKVHSDQAFSALHLVDSAENGASSFNSLSSGFVSSPSRNASDLSSFSSHRNEIKYNEADLTKVYVGLNSEKRVNKLESSSDLISSPAKRLTDLEESTFADSHEKEMEVNEVLPHKYLTALVAPRVVDQLEIGAADIQSNPNRSVPCDPCHSEICNNIQEERIQNLSAVSEMKVVDSSSELDSERSESVCLSQNDVQNNKESLSSPSFNQLKPETHSEMFVESPVNQRDAEVQLRNDGYHSLEKFQFHHQSSSQLEQLRIHPDEQSSFDFSSKSFLQETSPTKHVMHSLHPLIPELTNNHEEIPPMPPLPPMQWRMSKVQHSSLVSQREEIEATHASLQPIQPVKPNDKSQFGLSTSDRDTILYQNPFLPVMAVESSKLQRSPGFLAGLPEHSVAIPLQFPIMINKSNSQYNYLVMDKSQHQNSFLTLPVVKDESGESHLMPPTELAASGNDLTSAREHITPRQLTEETSSLEVKTFEQSSIYSERKQGDPSISPMAPPGIEVGQPNDSLLPSKGGTASPLDKSSRTPEFDNKMPNGKPKNKIVRPESPIIDIAAALDRSKVMTVYRF* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1861 1382 MobiDBLite consensus disorder prediction 422 443 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 1249 1269 - -
Amo04g1861 1382 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 1242 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 1340 1354 - -
Amo04g1861 1382 Gene3D - 1 90 - -
Amo04g1861 1382 PANTHER WASP-1 1244 1379 IPR028288 GO:0005856|GO:0030036
Amo04g1861 1382 MobiDBLite consensus disorder prediction 998 1024 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 1295 1359 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 581 602 - -
Amo04g1861 1382 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1244 1379 - -
Amo04g1861 1382 Gene3D - 104 246 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 991 1024 - -
Amo04g1861 1382 PANTHER WASP-1 1 1242 IPR028288 GO:0005856|GO:0030036
Amo04g1861 1382 MobiDBLite consensus disorder prediction 1324 1339 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 414 503 - -
Amo04g1861 1382 MobiDBLite consensus disorder prediction 459 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1861 Amo-Chr4 85612091 85619306 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1861 - - ahf:112743748 2543.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2928 14 124743614 124750802 Amo04g1861 04 85612091 85619306 hybridization
Amo04g1861 04 85612091 85619306 Amo12g2401 12 106359906 106368329 PCT
Amo04g1861 04 85612091 85619306 Amo02g2656 02 83024603 83032945 PCT
Amo12g2401 12 106359906 106368329 Amo04g1861 04 85612091 85619306 PCT
Amo02g2656 02 83024603 83032945 Amo04g1861 04 85612091 85619306 PCT