Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2656 ATGCCGCTCTCCAAGTACCACATTCGGAACGAGTACGGCCTCGCGGATCCCGAGCTGTACCGCGCCGCCGACGTTCGGGACGATCCGGAAGCTCTCCTTGAGGCCGTCGCCATGGGCGGCCTCGTCGGTCTCCTCCGCCAGCTCGGCGACCTCGCCGATAGTGGTTTCGGTGATTGCGGTACTGAGTTTGAAGAGAAAAAAAGATTAGAATTGAAGTTTGGTAGAATCACTTGGAGTTTGTGCTGCTGGATTGTGCTAGATTCGAATAGGTTTGCTGCCGAGATCTTCCATGATTTACATGAAGAAGTAATGGCTACTGCTGCAAGAGGTCATGGACTTATYACTCGTGTTCAACAGCTTGAGGCTGAAGTTCCTTCACTTGAGAAGGCTTTTTTCTCTCAAACTCATCATTCATCCTTCTACACGAATGGAGGGGTTGATTGGCATCCTAATCTTCGTTCTGAACAGAATCTTGTTACTCAAGGAGATCTGCCTCGATTTYTAATGGATTCTTATGAAGAATGTCGTGGTCCTCCGAGACTTTTCCTTCTGGATAAGTTTGATGTGGCTGGTGCTGGGGCTTGCCTGAAGCGTTACACTGATCCGTCATTTTTTAAAATGGAATCAGCTTCATTTGAAACCAAAATGGTAGAAGTTCACAGGGAAAAGAGAATACGTAAAATCAAGCAGAAGAAAGGACAACGYTTGCGGGATGGCGAAGGCCCTAATGTTGCACCATCACATGCAAAATTGCATCAGCTGCTTCTTGAGGAGCGTATTGAGAATGGTTACACTGATCCTGCACGTCTTGTGAAGTTGAAGAAAAGACAGTTGAYCGGATCTGCAGTTGAAGTAAAAGATGGGAAAAGTTACATGACAAAGTTCCTGGAAACTGCCTCACCTGATCATAAAATGATTTATGAAACTTCSATTATTCCTTTGTCTGTAAAGCCTATGTCGGATGATACCAGTGAAGCAGGGATCAAAARGCTTGAAATCAAMGAAATTTCTTCTAATCATCCCAAGTTTCCTATGGAAACAGAATTGGCAGTCGATGAACAAAAGAAAATAGAAGGGATCTTAGATGGGTACCATTCTGATACYATTAGTGAAGTTGACAATTATATGGATGCTTTAAACACCATGGAGTCAGAATTGGAAACAGACAATGAATGTAAACCTAAAAGGCGATTATTGAATATTCAAAAGGCAACAGACGGTGATGGCAAAGAAAACTATCAACCAGAGGCTCGGTTTTCATATTCTCAATCATTTGGAGATTCCTCAACGTCTGATGAGATTGGTTCATTCAAACAAGATAGAAATGAAGAACAAATTGAAGAGCATGCTCAGTTGTCTGATTCTCGCTCAACTGGGACATCCTCAATGTCAGACAATAGTTTGTTCAGAAGAGATGGCGATGATCATACYGAAATGCAATCTCACTTTTCAGATTCCCCATCTATTGGAAATTCTTCTATGTCAGATGACAATAGTTCTAGCAAGAAAGAAAGATCCCCTTCCWATCACACTGATTCATTAAGCTCTGTGGTTGAAGATACACTACCCYGACAGCCTCCCCATATTGRTGTTCATGATGCACCTGATGGTGAAGAAGAAATTTCTGATTCAGGMCAAGCCTCTAATGAACTGATGACTTCAGGACATGTATTGTGTTCTGTTCATGGCCCTGCTTCACCAGTGACTCTACCTCCACAGGCTCAATCAGATGAACTCCCATTTGACCCAGTTGAACTTAATTCAACAGTAGAAGAAGATGAAGAAAGAACAGATCWTATGAAATCTARGGTTGCTGAACCTGTCTCTCTCTKTGCSGTGAAAGAAGATGCTTGTCCTRTGGATTTGTCTGATAAAAATTCTCTAGACAAGTTWGATAATTATGATCCAAATGTTCAGTCRGATGATTTATTGCAATTTTCKAATAATTTAGAATTAGTTCAGGAAAATGAAGGCAGTGATCTTTCAGAAATAAAGAAGTTGCAGGTGGAATCACCTAATAAAAACRCTCTTGAAGTTTTGGTTGATAGAGATATTGGTTCAACAGGAGAGGATCCGATTTCCTCATCCATGGAAGAACTGGACTTGAATTCAGGTACAATGGRGGTGCTTGATTGTCAAGACTTGAAAGATGAGGATTGTATTATATCTACCCAACTTGGTTCRGAAGATTTGGCTCCTGTTGTGGATGTTCCTCCCATGAGTTGCCTTACCGGGGAGTTATCCTCAGATGTAACTCATAACAATCCACAGGATGAACCAAGTTTAGCCAAAAATGAACAAGTGTGTTCTGATGTWGAATCAATTTCTGAAGAGGGACTGGTGCCCGGTGATGAAATAAGATCCACCTCAGGTGTTGATCCTGTTGAAGGTGATGGTCKTGTTAAAGAGCTGTCTTCTCCTGATACTCCTGTGATGGTAAATGATGTGTTCAGTGAAAATGTTGATTCAGAAGACCAAGCTGTCTCCACTGTTCCTTCTGTTAATACTCCATCTGGAAGTTCTTCCAYTTTGCAAAAACCTCTCTCTTCTTCCTTGGATTATTATAAGATGGAAATGGAATCCAATGAAGTAAAATCAACCCAAATTTTAAAGGACTTGAATGTAGAYAAAAMGGATAGCCAACTGGAGCAATRGACAGCCATCTCACCACTTGATGTCATTTATTCTCCAACCATTAATTGTACAGATACGGAAGAATGTCTCTCTGCTGTTGCAGATCRGCATGAGAAAGAGATGGAAGTTAACAAGGCAGTTGCTAGAGAATCTTTGACAGAATTAGAGAGACAGAATGAAATGGATCAACCAATAGCTMRMTCTMCTGGTGTGCAATTGAATCTGGAGAAACAGGWACCTGGTGATCTTTCTAATTTAGAAAGATGTAATGATAATCAAAATTCATCTCCTTGGGAGAAACTCCAACACAGTGCTTCTGTCGACGACATGAAAATGGTGCASGAATTTTCAGGGTTAGATAGTCAGCAGTCAGAATCTATATTTGATGACTTGAATGATCCTTCACAGAACYAGAGAGAGAGTTTTTCATCACCTTMTAACAAGCTTGAGTCTGGAAGTGATGTAGAGCTGTTTTCACGATCACATGMTMGTGAATGGGATGCAGAGTTTATGCTCAGCGGTGAAGGAAACATAGCCTCTWAGAAAACTCAATTGGAGAAAGAAAGCATTCATGCCACTCCCGACTTCCCTTCAGATGACCATGCAGATGAACTGTCATCATCTCATCCCTTACCACAGTCATCTAGCCAGGAGGTTAACCCTACAGAACATGTCATGGAGCCATCGAAGTCTCTTCCCGATCTCTTTACRGAGTCAGCTGAGAATAATCTCGATGAGATGCCTCCTATGCCCCCTCTACCACCTATGCAATGGAGAATGGGCAAGGTTCAGCATTCTTCCCCTTTTCTGCAGAGAGAACAGGTAGAAGTAAYTCAGGCCTCATTCCAACCAATGCTGCCTTCAGGRCAACCAATGCTTCCAATTGAACCTGATAATACCMCTCAATTTGGTTTTCCAKCATCTGAYAGAGATAATTTGCTGTCTCAGAATCCATTTGTGCCTGTCATGGCAGTGAGTGATAAGCRCCAATCTTCTGGGTTTCCAGTGGGTGTTTCAGGGCATCCTGTTGCTATACCTTTTCAATTTCCTATCATGGTTAATGAAGCAAATGGTCAATACCTATTGTTGGACAGAAGCCAAATTGCAAATCCTTTCTATACATTACCTGTTGTAACCACCAGCAGGCCTCAGCATGGCTACATTGTTGCTTCTGAGGGACTAATGGCACAAAATTCAACCCTATACCCTCCAACTCCATCTGCCGATTTTTCTGCTTCTGTAACTGATTTCACCTCTCCACAGGAAAAATTGACCCAATCCCCAAGTCAATTAATGACTGAGACTAGTTTAGAAGTCAAAGCACATGAGCATCCCATAAGAAATGSCGTACCTGTGGCRACTTCCCAAGATTCTCATGTTACTTCTGGACAAGATTCCATCTCTGCAGACGAACAAACTCAACCTCTTATTCTGTCAAAGACAGAGACTAGTGAAGATGACTCACTTCAGCAGTCTACAGATAACAGGTTATCCGCTGAAAGCCCTCCACATGCTTATGTTGTTGCTTCTGAGGGAGAAACAGTTGAGAGTTCAGATCCTTGCCCTCCAATACCACCTGCTGAATGTGCTGTTCCTGAACATGATTCCATCTCTCCACAAGAAAAACAAATTCATCCTCCCAGTCAGTTTTCAACAGAGGCTAGTTCRGAAGTTAAAACACRGAATCAYTCTATGAGTAATGCTGAAGTGGGACAAGGACATCTGCCTATCTCACTCATGTTGCCACCTCACATGAATAGTATGGCACCTAATCAGCATTTCTTGCCTCCTGAGGGGGAAACATCATTGTCCTTAGATGCATCTGATCAAACTTCAGATTTTGAGAGTGAAAGGACAAATCCAAAACCAAAGAACAAGCTTCCTCGTCCTCGGAATCCMCTAATTGACGCTGTTGCTGCTCATGACAAAAGCAAGCTTAGGAAGGTTACTGAACGGGTTGTTCCTCAAACCGCCCCAAAGACAGATGAAAGAGATTCATTGCTAGAACAGATAAGAACAAAGTCCTTCAACTTGAAGCCTACTGTAGCGACGCGACCCAGCATTCAAGGTCCTAAAACAAACTTGAAGCTTGCCGCCATCTTGGAAAAAGCCAATGCAATTCGCCAGGCTTTGGCCGGAAGTGATGAAGARGATGATGCGGATAGTTGGAGTGAGTGA 4812 0.4194 MPLSKYHIRNEYGLADPELYRAADVRDDPEALLEAVAMGGLVGLLRQLGDLADSGFGDCGTEFEEKKRLELKFGRITWSLCCWIVLDSNRFAAEIFHDLHEEVMATAARGHGLITRVQQLEAEVPSLEKAFFSQTHHSSFYTNGGVDWHPNLRSEQNLVTQGDLPRFLMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKMESASFETKMVEVHREKRIRKIKQKKGQRLRDGEGPNVAPSHAKLHQLLLEERIENGYTDPARLVKLKKRQLXGSAVEVKDGKSYMTKFLETASPDHKMIYETSIIPLSVKPMSDDTSEAGIKXLEIXEISSNHPKFPMETELAVDEQKKIEGILDGYHSDTISEVDNYMDALNTMESELETDNECKPKRRLLNIQKATDGDGKENYQPEARFSYSQSFGDSSTSDEIGSFKQDRNEEQIEEHAQLSDSRSTGTSSMSDNSLFRRDGDDHTEMQSHFSDSPSIGNSSMSDDNSSSKKERSPSXHTDSLSSVVEDTLPXQPPHIXVHDAPDGEEEISDSGQASNELMTSGHVLCSVHGPASPVTLPPQAQSDELPFDPVELNSTVEEDEERTDXMKSXVAEPVSLXAVKEDACPXDLSDKNSLDKXDNYDPNVQSDDLLQFSNNLELVQENEGSDLSEIKKLQVESPNKNXLEVLVDRDIGSTGEDPISSSMEELDLNSGTMXVLDCQDLKDEDCIISTQLGSEDLAPVVDVPPMSCLTGELSSDVTHNNPQDEPSLAKNEQVCSDVESISEEGLVPGDEIRSTSGVDPVEGDGXVKELSSPDTPVMVNDVFSENVDSEDQAVSTVPSVNTPSGSSSXLQKPLSSSLDYYKMEMESNEVKSTQILKDLNVDKXDSQLEQXTAISPLDVIYSPTINCTDTEECLSAVADXHEKEMEVNKAVARESLTELERQNEMDQPIAXSXGVQLNLEKQXPGDLSNLERCNDNQNSSPWEKLQHSASVDDMKMVXEFSGLDSQQSESIFDDLNDPSQNXRESFSSPXNKLESGSDVELFSRSHXXEWDAEFMLSGEGNIASXKTQLEKESIHATPDFPSDDHADELSSSHPLPQSSSQEVNPTEHVMEPSKSLPDLFTESAENNLDEMPPMPPLPPMQWRMGKVQHSSPFLQREQVEVXQASFQPMLPSGQPMLPIEPDNTXQFGFPXSDRDNLLSQNPFVPVMAVSDKXQSSGFPVGVSGHPVAIPFQFPIMVNEANGQYLLLDRSQIANPFYTLPVVTTSRPQHGYIVASEGLMAQNSTLYPPTPSADFSASVTDFTSPQEKLTQSPSQLMTETSLEVKAHEHPIRNXVPVATSQDSHVTSGQDSISADEQTQPLILSKTETSEDDSLQQSTDNRLSAESPPHAYVVASEGETVESSDPCPPIPPAECAVPEHDSISPQEKQIHPPSQFSTEASSEVKTXNHSMSNAEVGQGHLPISLMLPPHMNSMAPNQHFLPPEGETSLSLDASDQTSDFESERTNPKPKNKLPRPRNPLIDAVAAHDKSKLRKVTERVVPQTAPKTDERDSLLEQIRTKSFNLKPTVATRPSIQGPKTNLKLAAILEKANAIRQALAGSDEEDDADSWSE* 1604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2656 1603 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1406 1603 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1162 1188 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 452 467 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 416 433 - -
Amo02g2656 1603 Gene3D - 139 251 - -
Amo02g2656 1603 Gene3D - 1487 1603 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 618 640 - -
Amo02g2656 1603 ProSiteProfiles WH2 domain profile. 1541 1559 IPR003124 GO:0003779
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1085 1102 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1276 1314 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 482 497 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1066 1084 - -
Amo02g2656 1603 Gene3D - 1 128 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 397 580 - -
Amo02g2656 1603 PANTHER WASP-1 1 53 IPR028288 GO:0005856|GO:0030036
Amo02g2656 1603 PANTHER WASP-1 1406 1603 IPR028288 GO:0005856|GO:0030036
Amo02g2656 1603 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 87 337 - -
Amo02g2656 1603 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 53 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 994 1033 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1419 1449 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1055 1138 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 397 413 - -
Amo02g2656 1603 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 334 1351 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1329 1377 - -
Amo02g2656 1603 Coils Coil 916 936 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 995 1028 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 434 451 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 745 765 - -
Amo02g2656 1603 PANTHER WASP-1 87 337 IPR028288 GO:0005856|GO:0030036
Amo02g2656 1603 PANTHER WASP-1 334 1351 IPR028288 GO:0005856|GO:0030036
Amo02g2656 1603 MobiDBLite consensus disorder prediction 1276 1514 - -
Amo02g2656 1603 MobiDBLite consensus disorder prediction 780 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2656 Amo-Chr2 83024603 83032945 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2656 - - aip:107625836 2844.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2401 12 106359906 106368329 Amo02g2656 02 83024603 83032945 hybridization
Amo14g2928 14 124743614 124750802 Amo02g2656 02 83024603 83032945 PCT
Amo04g1861 04 85612091 85619306 Amo02g2656 02 83024603 83032945 PCT
Amo02g2656 02 83024603 83032945 Amo14g2928 14 124743614 124750802 PCT
Amo02g2656 02 83024603 83032945 Amo04g1861 04 85612091 85619306 PCT