Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0368 ATGGATTCAAAACCTCCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGATGGTGTTTTTACAACAATAATAGACCAACAACAGCAAAAAGTAACCGTCACTGGAAGTGTAACTGTTGAAACCCTTCTCAGTAAACTTCTCAGAGCCGGTAAGCACGCCGAGATTTGGCCGGAAAATATCTCCGTCAAAGAGAACAAGAACAACACACACAAGTTGGAAAACGATAACCATTCTTATGCTGAAAAAACTACACAAAATTGTAACAAAGTTATGAGCAAGAACAGCAACATAAAACCCGGTCAAAAATCACCGGAAAAGTCTCCGGCCGGCAACCGTGAATCGCCGCAGGAGCACAAGGGTAGCCAGAGTGGTGGTGGTGGTGGTTCTGCTAAGAAGAAGAAAAAGAAAGGTCAGGGTGATGTTAGCGTGGATCATGGTTCCGCGGGTGCACCTGCACCTGCGGACGCTGGATTTGGGTTCCAGAATCAAGGGCTGGATTTTGGACGGGAAATGGGGAAAATGAATCTCATCCCTACACGTCAGAAGCAAGAAAAAGCCTTGTATACAGAAACTGGTTGTCCTCCACCGATGGTGTACGCTGGTGCTTACTACAATAGATTGTACCCCATGGGTGGTCCTTCATACTATGTTCCTCCTTATAATATCATGTGTTCGGGACTAGATCAAGAATATGGTTGTCAAATTCAATCAAGACCGTTGGTTTCCTTTGAGATTTTCAGCGATGAAAATGTGAATGGATGTTCAATTATGTGA 786 0.4377 MDSKPPLKYQTWFLKVSIHCDGVFTTIIDQQQQKVTVTGSVTVETLLSKLLRAGKHAEIWPENISVKENKNNTHKLENDNHSYAEKTTQNCNKVMSKNSNIKPGQKSPEKSPAGNRESPQEHKGSQSGGGGGSAKKKKKKGQGDVSVDHGSAGAPAPADAGFGFQNQGLDFGREMGKMNLIPTRQKQEKALYTETGCPPPMVYAGAYYNRLYPMGGPSYYVPPYNIMCSGLDQEYGCQIQSRPLVSFEIFSDENVNGCSIM* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0368 261 SUPERFAMILY HMA, heavy metal-associated domain 8 61 IPR036163 GO:0046872
Amo04g0368 261 MobiDBLite consensus disorder prediction 83 127 - -
Amo04g0368 261 MobiDBLite consensus disorder prediction 70 167 - -
Amo04g0368 261 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 90 261 - -
Amo04g0368 261 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 5 99 - -
Amo04g0368 261 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 90 261 - -
Amo04g0368 261 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 5 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0368 Amo-Chr4 6898001 6899460 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0368 - - mtr:MTR_2g436830 200.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3479 01 107383615 107385379 Amo04g0368 04 6898001 6899460 PCT
Amo11g2648 11 134554783 134556501 Amo04g0368 04 6898001 6899460 PCT
Amo04g0368 04 6898001 6899460 Amo01g3479 01 107383615 107385379 PCT
Amo04g0368 04 6898001 6899460 Amo11g2648 11 134554783 134556501 PCT