Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g2655 ATGGAGAGCACTAGCAATACCAACACCAACACCAACAACAAAGAGAGTAGTAGTAGTAGTAGTGGGAGGGTTCGGTTGTCAGAGGTGGTGGCAGATTGTGTTAAGAGGTGGTTTAGGGATACAATGAAGGAAGCTAAAGCTGGAGATGTTAGCATGCAGGTCTTGCTTGGTCAGATGTACTGTAGTGGTTATGGTGTTCCCAAAGATCCCCAAAAGGGAAGAGTTTGGCTGACCAGAGCATCAAAGACTCGTTCGTCTGTTTGGAAAGTTGGTGATAAGCGTCCAGGTTACAATGCTAGTGACTCTGATTCTGATGAAATGAAGGAGGATTCTTAA 336 0.4494 MESTSNTNTNTNNKESSSSSSGRVRLSEVVADCVKRWFRDTMKEAKAGDVSMQVLLGQMYCSGYGVPKDPQKGRVWLTRASKTRSSVWKVGDKRPGYNASDSDSDEMKEDS* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g2655 111 MobiDBLite consensus disorder prediction 87 111 - -
Amo02g2655 111 MobiDBLite consensus disorder prediction 1 25 - -
Amo02g2655 111 Gene3D Tetratricopeptide repeat domain 11 98 IPR011990 GO:0005515
Amo02g2655 111 SUPERFAMILY HCP-like 43 82 - -
Amo02g2655 111 MobiDBLite consensus disorder prediction 1 26 - -
Amo02g2655 111 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 8 111 - -
Amo02g2655 111 PANTHER EXPRESSED PROTEIN 8 111 - -
Amo02g2655 111 SMART sel1 50 85 IPR006597 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g2655 Amo-Chr2 83003714 83008744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g2655 - - ahf:112728105 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2402 12 106373514 106375783 Amo02g2655 02 83003714 83008744 hybridization
Amo14g2925 14 124708710 124714141 Amo02g2655 02 83003714 83008744 PCT
Amo04g1856 04 85516067 85521400 Amo02g2655 02 83003714 83008744 PCT
Amo02g2655 02 83003714 83008744 Amo14g2925 14 124708710 124714141 PCT
Amo02g2655 02 83003714 83008744 Amo04g1856 04 85516067 85521400 PCT