Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2769 ATGGAGAGTTTGGTGATGAGTGGGAAGAAGCTTTGTGTGATGGTGTTATGTTTGTACTGGGTTCATGCAGTGACAGCTTCTGTTACATATGATCACAAAGCAATTGTTGTTAATGGGCAGAGAAAGATTCTGTTTTCTGGTTCTATACACTACCCCAGAAGCACACCTCAGATGTGGCCAGAGCTTATTCAAAAAGCTAAAGAGGGAGGGGTGGATGTTATTCAAACCTATGTGTTTTGGAATGGCCATGAACCTTCTCCAGGGAAATATTATTTCGAGGATAGGTACGACTTAGTTAAGTTCATCAAGGTAGTGCAGCAAGCTGGACTTTATGTTAATCTCCGAATTGGTCCCTATGTATGTTCTGAATGGAACTTTGGGGGTTTTCCTGTTTGGCTAAAGTTTGTTCCAGGCATTGCTTTCAGAACAGATAATGAGCCTTTCAAGGCAGCAATGCAGAAGTTCACTGAGAAGATTGTGAGTATGATGAAGGCTGAGAATCTGTTTGAGACACAGGGGGGTCCAATAATTCTGTCACAGATAGAGAATGAGCTTGGACCAGTGGAATGGGAAATTGGTGATCCTGCAAAAGCTTATGCGAAATGGGCAGCTAAAATGGCTGTAGGTCTAGACACTGGTGTCCCTTGGATTATGTGCAAGCAAGAAGATGCTCCTGACCCTGTTATTGACACATGCAATGGGTATTACTGTGAAAACTTCACTCCCAACAAGAACTACAAACCAAAAATGTGGACAGAAAACTGGACAGGCTGGTGCACTTATTTTGGTGGTGGAGTTAATATTAGACCAGCAGAAGACTTGGCATTCTCAGTTGCTAGGTTCATACAAAATGGTGGTTCATTTGTTAACTATTATATGTATCATGGAGGAACTAACTTCGAGCGAACATCTGGTGGCCCCTTCATTACCACTAGCTATGACTATGATGCTCCAATTGATGAATATGGACTTTTAAATGAACCAAAATGGGGACATTTGAGAGATTTGCACAAAGCAATAAAGCTGTGTGAACCAGCTTTGATATCTGTAGATCCAAAGGTGACATCACTTGGAAATAACCTCGAGGCACATGTGTTCAAGACAGATTCTGGTGCTTGTGCTGCATTCCTTGCAAACTATGACACCAAATCTTCTGCAAAAGTTTCATTTGCAAATGAGCAATATGAACTACCACGTTGGTCCATAAGCATTCTTCCTGACTGCAAAACTGAAGTTTTCAACACTGCAAGGATTGGTGCTCAAAGCTCCCAGAAGAAGATGACTGTTGTAAAGAATGCATTTGATTGGGAGTCATACATTGAAGAACCTGCGTCGTCCAGCGAAGAGGATTCCATCACAGCGAATGCGCTTTGGGAGCAGATCAACATCACTAGAGATTCTACAGATTATTTGTGGTACTTGACAGATGTCAATATTGATCCTAATGAAGGTTTTATTAAGAGTGGAAAATGGCCTCTTCTTACAGTAATGTCAGCAGGCCATGCTTTACTAGTTTTCATTAATGGCCAACATTCAGGAACTTCTTACGCTGGAGCCGACTTTCCTAAACTAACATTTAATCAAACTGTTAATCTAAGGGCTGGCAACAACAAGATTTCTTTACTTAGTATTGCCGTCGGCCTCCCGCATGTTGGCATACACTTTGAGACATGGAATGTTGGGGTGTTAGGCCCTGTGACACTTGAGGGTGTAAATGAAGGGACCAGAGATTTGTCTCACCAGAAATGGTCTTACAAGGTTGGTCTGAAAGGTGAAGACTTAGGCCTTCAAACCGTGAGTGGGAGTGGTTCTGTTGAATGGGCACAAGGAACCTTATTGGCTAAGAAACAACCTTTGACATGGTACAAGACAAATTTTAACAAACCAGAAGGAAATGATCCATTGGCTCTAGACATGATCAGCATGGGAAAAGGTCAAGTATGGATAAATGGCCGAAGCATCGGCCGCCATTGGCCAGGATACACAGCACACGGAATTTGTTGGGATTGCGACTATGCCGGATCTTACACTGACAAGAAATGCAAAAAAAACTGTGGAGAACCTAGCCAGAGATGGTACCATGTTCCGAGGTCATGGCTGAGGCTGAGTGGGAACTATATGGTTGTGTTTGAAGAATGGGGAGGTGACCCTACTAGGATTTCTTTGGTGAAAAGAACAACAGATAGTGTGTGTGCTGATATATATGAAGATCAACCAACTCTGAAGAACAGGGAGAAGCTGGATTCTGGAAATGTTATTAGGCCAAAAGCACATTTGTGGTGTCCTCCAGGACAAAAGATGTCACAGATTAAGTTTGCTAGCTATGGTTTGCCACATGGAAGCTGTGGAAACTATAGACAAGGAGATTGTCATGCTCACAAATCATATGATGCTCCTCAAAGGAACTGCATTGGCAAACAATCATGCATGGTAACCGTTGCTTCTGAAGTTTTTGGGGGAGACCCATGTCCAGGAATTGCTAAGAAGCTCTCAGTTGAGGCCATATGCAGATAG 2514 0.4264 MESLVMSGKKLCVMVLCLYWVHAVTASVTYDHKAIVVNGQRKILFSGSIHYPRSTPQMWPELIQKAKEGGVDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKVVQQAGLYVNLRIGPYVCSEWNFGGFPVWLKFVPGIAFRTDNEPFKAAMQKFTEKIVSMMKAENLFETQGGPIILSQIENELGPVEWEIGDPAKAYAKWAAKMAVGLDTGVPWIMCKQEDAPDPVIDTCNGYYCENFTPNKNYKPKMWTENWTGWCTYFGGGVNIRPAEDLAFSVARFIQNGGSFVNYYMYHGGTNFERTSGGPFITTSYDYDAPIDEYGLLNEPKWGHLRDLHKAIKLCEPALISVDPKVTSLGNNLEAHVFKTDSGACAAFLANYDTKSSAKVSFANEQYELPRWSISILPDCKTEVFNTARIGAQSSQKKMTVVKNAFDWESYIEEPASSSEEDSITANALWEQINITRDSTDYLWYLTDVNIDPNEGFIKSGKWPLLTVMSAGHALLVFINGQHSGTSYAGADFPKLTFNQTVNLRAGNNKISLLSIAVGLPHVGIHFETWNVGVLGPVTLEGVNEGTRDLSHQKWSYKVGLKGEDLGLQTVSGSGSVEWAQGTLLAKKQPLTWYKTNFNKPEGNDPLALDMISMGKGQVWINGRSIGRHWPGYTAHGICWDCDYAGSYTDKKCKKNCGEPSQRWYHVPRSWLRLSGNYMVVFEEWGGDPTRISLVKRTTDSVCADIYEDQPTLKNREKLDSGNVIRPKAHLWCPPGQKMSQIKFASYGLPHGSCGNYRQGDCHAHKSYDAPQRNCIGKQSCMVTVASEVFGGDPCPGIAKKLSVEAICR* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2769 837 ProSiteProfiles SUEL-type lectin domain profile. 751 837 IPR000922 GO:0030246
Amo01g2769 837 PANTHER BETA-GALACTOSIDASE 11 830 - -
Amo01g2769 837 Pfam Beta-sandwich domain in beta galactosidase 347 418 IPR041392 -
Amo01g2769 837 Gene3D - 753 837 IPR043159 -
Amo01g2769 837 Gene3D - 597 731 - -
Amo01g2769 837 SUPERFAMILY (Trans)glycosidases 27 344 IPR017853 -
Amo01g2769 837 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 SUPERFAMILY Galactose-binding domain-like 402 572 IPR008979 -
Amo01g2769 837 PANTHER BETA-GALACTOSIDASE RELATED 11 830 IPR001944 GO:0004553|GO:0005975
Amo01g2769 837 Pfam Galactose binding lectin domain 759 836 IPR000922 GO:0030246
Amo01g2769 837 Gene3D Glycosidases 21 343 - -
Amo01g2769 837 SUPERFAMILY Galactose-binding domain-like 582 741 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2769 Amo-Chr1 98485002 98490063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2769 5 836 Glycoside Hydrolase AT3G13750 67.861 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2769 - - adu:107496611 1761.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2769 01 98485002 98490063 Amo13g2564 13 47676900 47682569 PCT
Amo01g2769 01 98485002 98490063 Amo03g1168 03 26770578 26775083 PCT
Amo13g2564 13 47676900 47682569 Amo01g2769 01 98485002 98490063 PCT
Amo03g1168 03 26770578 26775083 Amo01g2769 01 98485002 98490063 PCT