Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2686 ATGGCCAGCGACCGTTTGACCCGCGTTCACAGCCTCCGTGAAAGGCTTGACGAAACCCTGACAGCCAACAGGAATGAGATTCTAGCTCTTCTGTCGAGGATCGAAGCCAAGGGTAAGGGGATCTTGCAACACCACCAAGTGATTGCTGAGTTTGAGGAAATCCCTGAGGAGAACAGGCAGAAGCTAACTGATGGTGCTTTTGGAGAAGTTCTTAGATCTACTCAGGAAGCAATTGTTTTGCCTCCCTGGGTTGCTCTGGCAGTTCGTCCAAGGCCTGGTGTTTGGGAGTACCTTCGTGTCAATGTCCATGCTCTTGTTGTAGAAGAGTTGCAAGCTGCCGAGTACTTGCGCTTCAAGGAGGAGCTTGTTGATGGAAGTTCTAATGCCAACTTCGTTCTTGAGTTGGACTTCGAGCCCTTCACTGCCTCCTTCCCTCGCCCAACTCTCAACAAGTCTATCGGTAACGGCGTGCAGTTCCTTAACCGCCACCTGTCCGCAAAACTCTTCCATGACAAGGAGAGCTTGCATCCGCTTCTTGAATTCCTCAGGCTTCACAGCTACAAGGGCAAGACGTTGATGTTGAACGACAGAATCCATAACCCAGATTCACTCCAACATGTTCTAAGGAAGGCGGAGGAGTATCTGGGAACCCTTCCCGCTGAGACTCCTTACTCAGAATTCGAGCACAAGTTCCAGGAGATTGGATTGGAGAGAGGGTGGGGTGACACCGCCGAGCGTGTCCTTGAGTCCATCCAACTCCTCTTGGACCTTCTTGAGGCTCCTGATCCCTGCACCCTTGAGACCTTCCTCGATAGAATTCCCATGGTCTTCAACGTTGTCATCCTCTCTCCCCATGGTTACTTCGCCCAAGACAACGTTTTGGGCTACCCTGACACCGGTGGCCAGGTTGTTTACATCTTGGATCAAGTTCGTGCTTTGGAAAATGAGATGCTCCACCGCATCAAGCAACAAGGCTTGGATATCGTACCTCGCATTCTCATCATCACCCGTCTTCTCCCTGATGCCGTAGGAACCACTTGTGGCCAACGTCTTGAGAAGGTTTTTGGGACCGAGCACTCTCACATTCTTCGTGTTCCCTTCAGAACAGAGAAGGGAATTGTTCGCAAATGGATCTCAAGATTCGAAGTCTGGCCCTATTTGGAAACTTACACCGAGGATGTTGCACATGAACTTGCCAAGGAATTGCAAGGCAAGCCAGATTTGATTGTTGGAAACTACAGTGATGGAAACATTGTTGCCTCCTTGTTGGCACACAAACTAGGTGTCACTCAGTGTACCATTGCTCATGCACTTGAGAAGACCAAGTATCCGGAATCCGACATTTACTGGAAGAAGTTTGAAGAGAAGTATCACTTCTCATGCCAATTCACAGCTGATCTTTTCGCCATGAACCACACTGACTTCATCATCACCAGTACATTCCAAGAAATTGCCGGAAGCAAGGACACAGTTGGACAGTATGAGAGTCACACAGCATTCACCCTCCCCGGACTGTACCGTGTTGTTCACGGCATTGATGTGTTCGATCCAAAGTTCAACATTGTGTCCCCTGGTGCTGACCAAACCATTTACTTCCCATACACCGATGGTAGCCGCAGGTTGACTGCATTCCACCCGGAGATCGAAGAGCTTCTCTACAGCTCAGTGGAGAATGAAGAACACATTTGTGTGTTGAAGGACCGCAGCAAGCCAATCATCTTCACCATGGCTAGGTTGGACCGCGTCAAGAACATCACCGGACTTGTGGAATGGTACGGCAAAAACGCCCGCCTGCGCGAGCTTGTGAACTTGGTTGTGGTGGCCGGAGACAGGAGGAAGGAGTCGAAGGATCTTGAGGAGAAGGCGGAGATGAAGAAGATGTACGGGCTGATCGAGACGTACAAGCTGAACGGGCAGTTCAGGTGGATCTCGTCACAGATGAACCGTGTGAGGAATGGAGAGCTGTACCGTGTAATCTGCGACACCAAGGGAGCGTTCGTGCAGCCCGCCGTGTACGAAGCGTTCGGGTTGACGGTGGTTGAGGCCATGACATGCGGCTTGCCAACCTTCGCAACATGCAATGGTGGTCCTGCTGAGATCATTGTTCATGGCAAGTCGGGCTTCCACATCGACCCTTACCATGGTGACCGCGCCGCTGATCTGCTCGTTGATTTCTTTGACAAGTGCAAGGTTGATCCAACCCACTGGGACAAGATTTCCCAGGGTGGTCTCCAGCGTATTGAAGAGAAGTACACATGGCAAATCTACTCTCAGAGGCTTTTGACTCTAACCGGTGTCTATGGCTTCTGGAAGCATGTCTCCAACCTTGACCGCCGTGAGAGCCGCCGTTACCTTGAGATGTTCTATGCTCTTAAATACCGCAAATTGGCCGAGTCTGTGCCACTTGCTGTGGAGGAGTAA 2421 0.5081 MASDRLTRVHSLRERLDETLTANRNEILALLSRIEAKGKGILQHHQVIAEFEEIPEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQAAEYLRFKEELVDGSSNANFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIHNPDSLQHVLRKAEEYLGTLPAETPYSEFEHKFQEIGLERGWGDTAERVLESIQLLLDLLEAPDPCTLETFLDRIPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALENEMLHRIKQQGLDIVPRILIITRLLPDAVGTTCGQRLEKVFGTEHSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTDGSRRLTAFHPEIEELLYSSVENEEHICVLKDRSKPIIFTMARLDRVKNITGLVEWYGKNARLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFDKCKVDPTHWDKISQGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVEE* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2686 806 Gene3D Glycogen Phosphorylase B; 527 753 - -
Amo01g2686 806 Gene3D - 25 145 - -
Amo01g2686 806 Gene3D Glycogen Phosphorylase B; 280 796 - -
Amo01g2686 806 Pfam Sucrose synthase 8 553 IPR000368 GO:0005985|GO:0016157
Amo01g2686 806 PANTHER - 1 805 IPR012820 GO:0005985|GO:0016157
Amo01g2686 806 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 295 763 - -
Amo01g2686 806 PANTHER SUCROSE SYNTHASE 1 805 - -
Amo01g2686 806 Gene3D - 146 275 - -
Amo01g2686 806 Pfam Glycosyl transferases group 1 564 725 IPR001296 GO:0016757
Amo01g2686 806 TIGRFAM sucr_synth: sucrose synthase 24 802 IPR012820 GO:0005985|GO:0016157
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2686 Amo-Chr1 97701597 97705901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2686 6 806 Glycosyltransferase AT3G43190 85.643 0.0 1439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2686 K00695 - gmx:547508 1578.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g2686 01 97701597 97705901 Amo13g2841 13 62138722 62144544 PCT
Amo01g2686 01 97701597 97705901 Amo03g1579 03 43113737 43119718 PCT
Amo13g2841 13 62138722 62144544 Amo01g2686 01 97701597 97705901 PCT
Amo03g1579 03 43113737 43119718 Amo01g2686 01 97701597 97705901 PCT