Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0779 ATGGCTCTGTTCTCTGACCACCAACATTTTTCTGAAATGGCCTTCGTTTTCGTCCTTCTTCTTGTTCTTGAAGGAGTTTCAGGGGCTACATTTACGTTTGTGAACAAGTGTGATTACACAGTATGGCCGGGAGTATTGGGAAAGCCTGACCTGGAAACCACAGGATTCGAGCTCTCCAAGGGAAGTTCTCGAAGTTTCCAGGCTCCACCTGGTTGGTCCGGTAGATTCTGGGCAAGAACTAACTGCAAATTCGACGATGCCGGTCACGGAACATGCGCTACCGGCGACTGTGGATCGGGCGGTATCGCCTGCAATGGCGCCGGTGCTTCCCCTCCGGCGACGCTGGCGGAGTTCACGATCGACCCAGCGGGCTCGAAAGACTTCTACGACGTCAGCCTCGTCGATGGCTATAATCTGCCGATGATGGTGGAAGCGAACGGAGGGTCAGGATCATGCGCAACCACTGGATGTGCGGCGGATCTCATCAGGCGGTGTCCGTCGGAATTGAAGGCAGACGGCGGCGACGCCTGTAAGAGTGCTTGTGACGCGTTTGGGAAACCGGAATATTGCTGCAACGGCGACTTCGGTTCGCCGTCAACTTGCAGGCCGTCGATGTATTCGGAGATTTTCAAATCGGCGTGTCCTAAAGCGTATAGCTACGCCTACGATGATTCGACTAGTACCTTCACCTGCGCCGGAGCTGACTATACTATAACATTTTGTCCTTCTTCTTCCCCAAGTCTGAAATCGGCATCAATAGGGGTTGACGCGCAACAGTCAGTGGAACAAGCAGCCATGGCAACTTCTTCTTGGATTGCAAATTTGGCTACTGGCCATTCCGCTTCAATTCACCCTTCAATCTCTCTTCTTCTTCTACCTCTTATTCTCATTGTTTCCTTCATTTAA 906 0.5199 MALFSDHQHFSEMAFVFVLLLVLEGVSGATFTFVNKCDYTVWPGVLGKPDLETTGFELSKGSSRSFQAPPGWSGRFWARTNCKFDDAGHGTCATGDCGSGGIACNGAGASPPATLAEFTIDPAGSKDFYDVSLVDGYNLPMMVEANGGSGSCATTGCAADLIRRCPSELKADGGDACKSACDAFGKPEYCCNGDFGSPSTCRPSMYSEIFKSACPKAYSYAYDDSTSTFTCAGADYTITFCPSSSPSLKSASIGVDAQQSVEQAAMATSSWIANLATGHSASIHPSISLLLLPLILIVSFI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0779 301 ProSiteProfiles Thaumatin family profile. 28 242 IPR001938 -
Alju12g0779 301 FunFam THAUMATIN-LIKE PROTEIN 1 29 242 - -
Alju12g0779 301 Pfam Thaumatin family 35 242 IPR001938 -
Alju12g0779 301 Gene3D Thaumatin 29 242 IPR037176 -
Alju12g0779 301 PANTHER OS03G0233200 PROTEIN 16 242 IPR001938 -
Alju12g0779 301 CDD TLP-PA 30 241 - -
Alju12g0779 301 PIRSF PR5 2 285 IPR001938 -
Alju12g0779 301 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Alju12g0779 301 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Alju12g0779 301 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Alju12g0779 301 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Alju12g0779 301 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Alju12g0779 301 SMART tha2 31 242 IPR001938 -
Alju12g0779 301 SUPERFAMILY Osmotin, thaumatin-like protein 29 243 IPR037176 -
Alju12g0779 301 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0779 Alju-ChrAlju12 21688418 21690379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0779 13 283 Receptor kinase-like Gene Family AT5G38280 45.230 7.85e-81 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0779 12 21688418 21690379 Alju12g0779 12 21688418 21690379 ECH
Alju12g0779 12 21688418 21690379 Alju09g2393 09 46889266 46890819 ECH
Alju02g1895 02 18191233 18194072 Alju12g0779 12 21688418 21690379 ECH