Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1895 ATGGGACGCCTTTTTCGCTTCCTCCTTCTTCTCATCTTTCTTGCACTTTCTTGCCTATCGGAGGTGCAATCGGCGTCTTTCAAGATTGTAAATAAGTGTCGCCACACGATTTGGCCCGGTTTGCTCTCTGGCGCCACTTCTCCACAGCTTTCCACTACTGGATTCGCTCTTCAAAGTGGCAAGTCCAAGACTATAACGATCCCGAAATCTTGGTCGGGTCGGATATGGGCTCGGACTCTTTGTGGTCAAGATTCTGACGGAAAGTTCTCCTGCCTCACTGCAGACTGCGGCTCCGGTCAAGTACAGTGTGCCGGTGGAGCTAAGCCGCCCGCCACGTTGGCTGAGTTCACTCTCAACGGCGCCGACGGGTTAGATTTCTACGACGTGAGCTTAGTCGATGGCTACAACCTGCCGATGCTGATCGTTGCAAAAGGAGGAAAACGGGGTGGATGTAGCGCCACCGGATGTTTGGTCGACCTGAACGGGGGATGTCCGGCTGATCTAAGGGTGGCGCGTGGGAACGGGACCGGTACTGGTGGCAATAGCGTGGCTTGCAGAAGCGCGTGTGAGGCCTTTGGGGATCCACAGTATTGTTGCAGTGAGGCGTACGCTACGCCCGACACGTGTCATCCATCAGTATATTCGGAATTCTTCAAGCACGCTTGCCCCCGCGCGTATAGCTACGCTTACGATGACAAGACCAGCACGTACACTTGTGCTTCGGCTGACTACTTGATCATATTCTGCCCCTTACCCTACACCAGCCAGAAGTTGCTGGGAGCACGAAAAGATGGGGCACCACTTCCCCTTGTAAATAAAACCATGATGTACTTGAAGCATTCAGGAGTTTCTTCATCAACAGGTCTGAATCAAATGCAGATTATGGCTTATATTGCCTCTCTTACAGCAGCATCTTTCCTGCTTTGCTCTCTTTTTGACCCGTTATGA 948 0.5222 MGRLFRFLLLLIFLALSCLSEVQSASFKIVNKCRHTIWPGLLSGATSPQLSTTGFALQSGKSKTITIPKSWSGRIWARTLCGQDSDGKFSCLTADCGSGQVQCAGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKGGKRGGCSATGCLVDLNGGCPADLRVARGNGTGTGGNSVACRSACEAFGDPQYCCSEAYATPDTCHPSVYSEFFKHACPRAYSYAYDDKTSTYTCASADYLIIFCPLPYTSQKLLGARKDGAPLPLVNKTMMYLKHSGVSSSTGLNQMQIMAYIASLTAASFLLCSLFDPL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1895 315 PANTHER OS03G0233200 PROTEIN 12 250 IPR001938 -
Alju02g1895 315 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Alju02g1895 315 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Alju02g1895 315 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Alju02g1895 315 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Alju02g1895 315 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Alju02g1895 315 CDD TLP-PA 26 249 - -
Alju02g1895 315 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Alju02g1895 315 Pfam Thaumatin family 31 250 IPR001938 -
Alju02g1895 315 Gene3D Thaumatin 25 250 IPR037176 -
Alju02g1895 315 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Alju02g1895 315 ProSiteProfiles Thaumatin family profile. 24 250 IPR001938 -
Alju02g1895 315 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Alju02g1895 315 FunFam THAUMATIN-LIKE PROTEIN 1 25 250 - -
Alju02g1895 315 SMART tha2 27 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1895 Alju-ChrAlju02 18191233 18194072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1895 7 250 Receptor kinase-like Gene Family AT5G38280 48.594 8.36e-81 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1895 02 18191233 18194072 Alju02g1895 02 18191233 18194072 ECH
Alju02g1895 02 18191233 18194072 Alju12g0779 12 21688418 21690379 ECH
Alju02g1895 02 18191233 18194072 Alju09g2393 09 46889266 46890819 ECH