Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2393 ATGAGTGTGGCGGTTGTCACCAGTTTACCTTTGTTTGTCTATAAAAATGATGCATCTCCCCACGCTCAGGACTCCCCCTCACCTCTTCCTCTTCCTCTTCCTCTTCCTATTCCCTTCGCTCTTTTTCTTCTCAGAAAGAGATCTCAGCCCCTGCCTCTTCACCTGCTGAGTTTTGCATCTGAGCAACAAGAGGCAGGCGTGGTACCTTCTACTTCACCAACTCAACTCTTATTCCAACCATATCAATTCTTTTTACAACATTCAGCTGCTCATCGGAGGAAAGCAATAATGGCCTTGTTATTATCTTACTTTCTGAATTTTCCTCAATTGCTCTTCAGTTTCTCCATTTTTCTCTTTTTCAGAGGAACTTCGGGCGCTACATTTACGTTTGTGAATAAGTGTGGTAACACGGTATGGCCGGGTATTCTAGGAAAACCAGACATCGGAAGTACGGGATTCGAGCTGGCAAGAGGGAGCTCTAAAAGCTTCCAAGCCCCTCCGGGTTGGTCCGGAAGATTCTGGGCCCGAACCGACTGCAAATTCGATGACTCCGGCCACGGAACTTGTGCCACCGGCGACTGCGGTTCCGGCCAAATGCTGTGCAACGGCGCCGGAGCAACGCCTCCGGCGACCTTGGCCGAGTTCACCCTCGGCTCATCCGGCTCCCAGGACTACTACGACGTCAGCCTCGTCGATGGCTTCAATCTGCCGATGGCGGTGGAAGCGAGGGGAGGCTCCGGATCCTGCTCGGGCACAGGCTGCGTGGCGGATCTAAACCGGCGTTGCCCGTCGGAGCTGAGGGTGGAGGGCGGCGACGCCTGTAACAGTGCATGCGGTGCGTTTGGAAAGCCAGAGTTTTGCTGTAACGGGGATTATGGGTCACCGTCGACGTGTAAACCGTCGATGTACTCGGTGATGTTCAAGTCGGCATGCCCGAAATCGTATAGTTACGCCTACGACGATGCTACCAGCACGTTTACTTGTACAGCCGCCGACTATACAGTCACATTCTGTCCTCCTTCCCCAAGCCTTAAGTCTACGGGTTCGTCGCCGACGGGAGCAGATCCGTCTTCGGGATCATCGTCTGTGGAAGAAGGTGCACTGGCTTCTACTTCATGGCTAGCTAACATGGCAACAGGGGCTTCCACGAGGAATCGTGATCGGGGAGCTCGAAATTCTGCAATTTTTGGGGCTCTTAGTGTCATTGTTTCCTTTTTAGTGTTGTAG 1227 0.5273 MSVAVVTSLPLFVYKNDASPHAQDSPSPLPLPLPLPIPFALFLLRKRSQPLPLHLLSFASEQQEAGVVPSTSPTQLLFQPYQFFLQHSAAHRRKAIMALLLSYFLNFPQLLFSFSIFLFFRGTSGATFTFVNKCGNTVWPGILGKPDIGSTGFELARGSSKSFQAPPGWSGRFWARTDCKFDDSGHGTCATGDCGSGQMLCNGAGATPPATLAEFTLGSSGSQDYYDVSLVDGFNLPMAVEARGGSGSCSGTGCVADLNRRCPSELRVEGGDACNSACGAFGKPEFCCNGDYGSPSTCKPSMYSVMFKSACPKSYSYAYDDATSTFTCTAADYTVTFCPPSPSLKSTGSSPTGADPSSGSSSVEEGALASTSWLANMATGASTRNRDRGARNSAIFGALSVIVSFLVL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2393 408 SUPERFAMILY Osmotin, thaumatin-like protein 126 340 IPR037176 -
Alju09g2393 408 PANTHER OS03G0233200 PROTEIN 112 339 IPR001938 -
Alju09g2393 408 FunFam THAUMATIN-LIKE PROTEIN 1 126 339 - -
Alju09g2393 408 ProSitePatterns Thaumatin family signature. 185 201 IPR017949 -
Alju09g2393 408 Pfam Thaumatin family 132 339 IPR001938 -
Alju09g2393 408 Gene3D Thaumatin 126 339 IPR037176 -
Alju09g2393 408 CDD TLP-PA 127 338 - -
Alju09g2393 408 PRINTS Pathogenesis-related protein signature 151 160 IPR001938 -
Alju09g2393 408 PRINTS Pathogenesis-related protein signature 224 240 IPR001938 -
Alju09g2393 408 PRINTS Pathogenesis-related protein signature 329 338 IPR001938 -
Alju09g2393 408 PRINTS Pathogenesis-related protein signature 172 183 IPR001938 -
Alju09g2393 408 PRINTS Pathogenesis-related protein signature 127 139 IPR001938 -
Alju09g2393 408 MobiDBLite consensus disorder prediction 344 363 - -
Alju09g2393 408 SMART tha2 128 339 IPR001938 -
Alju09g2393 408 ProSiteProfiles Thaumatin family profile. 125 339 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2393 Alju-ChrAlju09 46889266 46890819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2393 110 382 Receptor kinase-like Gene Family AT5G38280 44.211 1.47e-75 246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2393 09 46889266 46890819 Alju09g2393 09 46889266 46890819 ECH
Alju12g0779 12 21688418 21690379 Alju09g2393 09 46889266 46890819 ECH
Alju02g1895 02 18191233 18194072 Alju09g2393 09 46889266 46890819 ECH