Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1889 ATGTACAGAGAGCGAGCAAGTGTTGGATCCAAATCGGAGGTGAGTTCCGTTGATCGAAAGCGAATCAACGACGTTCTCGACAAGCAGCTTGAACGATCCTCGCCGTCCACTTCGAGGACAATCAACGGCAAGGATAGGTCGGTGCAATCTGTATTGACGGGCAAGTCACCGGCTGATCACAAGGATTTTCGCTCTGCCTCCATATCTTCTAAGAAATCTAACGTTTCAGATGTTGCAGAGGAATCTGAAACAGACAGTGAGGAGTCAGAAGTTAGTGGTTCGGATGGAGATGACACATCTTGGATTTCATGGTTTTGCAATCTAAGAGGAAATGAATTCTTTTGCGAGGTTGATGATGATTACATCCAAGACGATTTCAACCTCTGTGGATTAAGTAGTCAAGTTCCTTACTATGATTACGCTCTAGATTTAATTTTGGATGTTGAATCCTCCCATGGTGACATGTTCACAGAGGAACAAAATGAGTTAATTGAATCAGCAGCAGAAATGCTTTATGGTCTTATTCATGCTCGTTACATATTGACTGGCAGAGGAATGGCTGCTATGCTGGACAAGTACAAAAACTATGATTTTGGGAGATGCCCGAGAGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCAGATATTCCTAGATCAAGTACCGTGAAAATATATTGTCCTAGATGTGAAGATATTTACTATCCGCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACTACATTTCCACACCTCTTCCTTATGACTTACGGACAGCTGAAGCCACAAAAGCCCTTGCAGAGCTATGTGCCTAGAGTCTTCGGCTTCAAAATTCATAAGCCATGA 864 0.4317 MYRERASVGSKSEVSSVDRKRINDVLDKQLERSSPSTSRTINGKDRSVQSVLTGKSPADHKDFRSASISSKKSNVSDVAEESETDSEESEVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGLIHARYILTGRGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPLQSYVPRVFGFKIHKP 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1889 287 Gene3D - 198 272 - -
Alju09g1889 287 ProSitePatterns Casein kinase II regulatory subunit signature. 201 232 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 93 197 IPR016149 GO:0005956|GO:0019887
Alju09g1889 287 FunFam Casein kinase II subunit beta 93 197 - -
Alju09g1889 287 MobiDBLite consensus disorder prediction 14 28 - -
Alju09g1889 287 PRINTS Casein kinase II regulatory subunit family signature 247 264 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 PRINTS Casein kinase II regulatory subunit family signature 219 240 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 PRINTS Casein kinase II regulatory subunit family signature 100 116 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 PRINTS Casein kinase II regulatory subunit family signature 172 193 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 PRINTS Casein kinase II regulatory subunit family signature 117 131 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 PRINTS Casein kinase II regulatory subunit family signature 197 218 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 MobiDBLite consensus disorder prediction 1 97 - -
Alju09g1889 287 SUPERFAMILY Casein kinase II beta subunit 98 286 IPR035991 GO:0005956|GO:0019887
Alju09g1889 287 MobiDBLite consensus disorder prediction 29 54 - -
Alju09g1889 287 SMART CK_II_beta_2 100 283 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 Pfam Casein kinase II regulatory subunit 100 283 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 PANTHER CASEIN KINASE II SUBUNIT BETA 79 286 IPR000704 GO:0005956|GO:0019887
Alju09g1889 287 MobiDBLite consensus disorder prediction 80 94 - -
Alju09g1889 287 FunFam Casein kinase II subunit beta 198 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1889 Alju-ChrAlju09 42683398 42685796 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g1889 09 42683398 42685796 Alju12g0417 12 5063666 5066374 CCT
Alju12g0420 12 5105312 5108553 Alju09g1889 09 42683398 42685796 CCT
Alju09g1889 09 42683398 42685796 Alju09g1889 09 42683398 42685796 ECH