Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0420 ATGTACAGAGTGCAAGGAGGTGGTGTTGGGTCCAAATCCGAGGTTGGTTCCGTCGATCGGAAGCGAATCAACGACGTCCTCGACAAGCAGCTCGAGCGATCTTCTCCGTCCACTTCTAGGGCTATCAGGGCCAAGGATAGGTCGTCGGAGCAGTCGCTTTCCTCCTCTAAGCCGCCCTCTGATCCCAGGGACTCTCGCGCTGCCTCCATCTCGAAGAATTCCAACCCTTCACATGCAGAGGAATCTGAAACAGACAGTGAAGCATCAGATGTTAGTGGTTCTGATGGAGATGATACATCTTGGATCTCATGGTTTTGTAATCTCAGAGGAAATGAATTCTTTTGCGAGATAGATGATGATTACATACAAGATGAATTCAACCTCTGTGGATTAAGCAGTCAAGTGCCTTATTACGATTATGCACTTGATCTAATTTTGGATGTTGAGTCCTCTCATGAGGAACAAAATGAATTAATAGAATCAGCAGCAGAGATGCTTTATGGCTTGATTCATGCTCGGTACATTTTGACGAGCAAAGGGATGGTCACTATGCTGGACAAGTACAAGAACTATGACTTTGGAAGATGTCCAAGAGTTTACTGCTCAGGACAACCCTGCGTTCCAGTTGGTCAGTCAGACATCGCTAGGTCAAGTACTGTAAAAATCTATTGCCCCAAGTGTGAAGACATTTATTACCCGCGGTCAAAGTATCAAGGTAACATTGATGGAGCGTACTTTGGAACCACATTTCCTCACCTCTTCTTGATGACATATGGGCATCTGAAGCCGCAAAAGCCGTCCCTGAGCTATGTTCCAAGAGTTTTTGGATACAAAATTCACAAGCCATGA 849 0.4547 MYRVQGGGVGSKSEVGSVDRKRINDVLDKQLERSSPSTSRAIRAKDRSSEQSLSSSKPPSDPRDSRAASISKNSNPSHAEESETDSEASDVSGSDGDDTSWISWFCNLRGNEFFCEIDDDYIQDEFNLCGLSSQVPYYDYALDLILDVESSHEEQNELIESAAEMLYGLIHARYILTSKGMVTMLDKYKNYDFGRCPRVYCSGQPCVPVGQSDIARSSTVKIYCPKCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGHLKPQKPSLSYVPRVFGYKIHKP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0420 282 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 93 192 IPR016149 GO:0005956|GO:0019887
Alju12g0420 282 SMART CK_II_beta_2 100 278 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 MobiDBLite consensus disorder prediction 15 29 - -
Alju12g0420 282 MobiDBLite consensus disorder prediction 48 77 - -
Alju12g0420 282 SUPERFAMILY Casein kinase II beta subunit 98 281 IPR035991 GO:0005956|GO:0019887
Alju12g0420 282 FunFam Casein kinase II subunit beta 93 192 - -
Alju12g0420 282 MobiDBLite consensus disorder prediction 1 96 - -
Alju12g0420 282 Pfam Casein kinase II regulatory subunit 100 278 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 PRINTS Casein kinase II regulatory subunit family signature 100 116 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 PRINTS Casein kinase II regulatory subunit family signature 117 131 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 PRINTS Casein kinase II regulatory subunit family signature 214 235 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 PRINTS Casein kinase II regulatory subunit family signature 192 213 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 PRINTS Casein kinase II regulatory subunit family signature 167 188 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 PRINTS Casein kinase II regulatory subunit family signature 242 259 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 Gene3D - 193 267 - -
Alju12g0420 282 PANTHER CASEIN KINASE II SUBUNIT BETA 79 281 IPR000704 GO:0005956|GO:0019887
Alju12g0420 282 FunFam Casein kinase II subunit beta 193 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0420 Alju-ChrAlju12 5105312 5108553 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0420 12 5105312 5108553 Alju09g1889 09 42683398 42685796 CCT