Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1563 ATGCCTACGCCGGTCGGAGTAGCCAAGCAATGCTTGACGCCGGAGGCAGCTCGCGCTCTCGAAGAAGCCGTCTCCGTCGCGCGCCGTCGTGGACACCCCCAGACCACCTCGCTCCATGCTGTCTCCGCCTTGCTTTCGTTGCCGTCGTCTACCTTACGTGACGCCTGTGCTCGTGCCCGGAACTGTGCCTACTCGCCTCGGCTTCAATTCAAGGCGCTAGAGTTGTGCCTGAGCGTATCGCTCGACCGGGTCCCCTCGACTCAACTCGCCGACGACCCGCCAGTCTCTAACTCGCTCATGGCCGCCATCAAGCGCTCCCAGGCGAATCAGAGAAGGCAGCCCGATAATTTCAACATTTACAATCAAATATTGCCGCAGCCTACTTCGGTTTCGTGTGTGAAGGTCGAGCTTCAACATTTGATATTATCGATTCTCGATGATCCGGTCGTGAGCCGGGTATTCGGCGAAGCGGGTTTTCGAAACTCCGAAATTAAAATTGCGATTCTTCGTCCTCTTCCACAGCTACTCAGATACTCACGCTCCAGAGTCCCCCCTATATTCCTCTGCAACTTGACGGAGCATCCGGACCCGGGCCGTCGGAGCTTCAGTTTCCCGTTTACCGGGTCTTTCGGAACCTGCGACGGCGGAGCTGATAATTACAAAAGAATCGGAGATGTGCTTTGTAGGAGCAGAGGGAGAAATCCCCTGCTTCTGGGTGTATGCGCAGATGATGCTCTGCATAGTTTCACAGAAGATGTTAACAAACAAAGAGATGTTGCTCTGCCAGTGGAGTTATCTGGATTGCGCGTGATATGCATAGGAAAAGACATTTCCAAGTTTGTCTTTGAGAATTGCGATAACGAGACTTTCAGTTCAAGGCTTAAGGAGATTGCTGAAACGATAGAACAGGGAGTAGGACCTGGTTTGGTGGTGAACTTCGGGGAATTGAAGTATTTGATTGATGAGAATGCTTCAAATGAAGCTGTGAATTATGTAGTTGCTGAATTGGTGAAGTTGTTGGAGCTTAATTATGGCAAGTTTTGGTTGATGGGAGCTGCGGCGAGCTATGAAAGTTACCTGACATTCGTGGCAAGGTTTCCATCTATTGAGAAGGATTGGGACTTGCAGCTTCTGCCCATCACATCTACTCGGCCTCAGGATGAATCACATCAGAGGCCTAGGTACAGCTTAATGGATTCGTTTGTCCCATTTGGTGGCTTGTTTTCTTCACCTTCTGATTTGAAAGGTCCGCCACAAGGCTCATATTATTGTGTTCCCCGTTGCCTTCAATGTGGTGAAAGTTGTGTGCAAGAAGTGCTTCCAGCTTCAAACGAGAGGCTGTCTGCTTTGGCTGCTGATTCTTACCATTCTGATTTACCTCCATGGTTGCGGGCTGCTGACCTTGGCATAACAAAAGGGTTGAATTATAAGACAAAAGAAGACAACGTTCGGCTGGATACTAGTGAATCTGGGCCTATCAAGAAATTGGACAAGACATGCCAGCATCTGCATAATAGTCAGCAATCCTCTGAAGCAATTCCATGTCAAACTGTCATGAGTTTCCGATGCTCTGATGGTGAAAAGGCAGATGTTGACAATCACAGCAATAAAATTTCAGATGCGTCACCTGGTGGCGTGCACATCGATCTCAATTCAAGCGTACCCCTTGCAGAGGAGACCATTTCTACACCACATTCAAGTAGTCCGGTTCCTGTCGTTTCCAAAGAGAAGCCGGAGAAACATATTTCTAAAGCCTTAGAGATGTTCCAGAAAGCGAAAAAGCTTGAGTCAGGTGACCTAAGATCATGCAACATGTCCAATTCAAGCATGTGTGATGGTAGCCAATTGTCTCCCTCATCTGTGACTTCTGTAACCACAGATCTAGGTATAGGAATTTGCATTTCTCCTATAAGCAACAAATCTCAGAAACCAACCATGGGGGGTCCCAAGGAAATTGCGAGTCCCCTCTCTCCAAACCATAATTTAGTTAACAGAGATGTCTTTAAGCATCCGGCCCACTCTTCATCCTGCTTAAGTTCTGACCATTCTGGACAATATGATCTAAGAAATCCTAAAATTCTTTTTGAAGCTCTTGCCAAAAAGGTTACCGGGCAGGATGATGCCTTGCAAAGCATTGTAAAAACAATATCCTACTGTGAAACAAGCAGGGGAAAATGCCTAGGAGGAAGTCAACGAGAGGGCATATGGATGAATTTTGTTGGAACTGATAGGATTGGTAAGAAGAAAATTGCTGTTTCTCTGGCTGAGATTTTGTATGGAAGCCAGGCAAGTTTTATTTCTGTGGATTTAAATTCTGAAGAAATAAATGGACACGATGTGAAATTTAGAGGAAAGACAGTTGTTGATGTTTTAGTTGGGGAGTTGTGCAAAAATCCTTTGTCTGTGGTTTTCCTTGACAATGTAGACAAGGCTGATATGATGGATCAAAATAGTCTATCTCAAGCTGTCAAGACTGGAAAAATTATAGGCTCGTGTGGAAGAGAAGTTGGTGTAAACAATGCAATAATTGTGACATCTTTCTCAGTTCAAGAAGATAATTTGAATTGCACACCAAAGACTGAATTCTCCAGCTATTCTGAGGAAAGAGTATCAAGGACAAAAGGGACACCAATCAAGATGAAGGTTGAACATGTAATTGGAGACATCAGAAGTCCAAGCCTTGCTGTACTTAAATGTTCAACAAAGGGCATTCCCAATCCAATCCTTGTAAATAAAAGAAAGCTGAGTTGCGACAATGCCCTTAATGGTCACCACAAAAGCTCAGAAATGGCTAAAAGGGCTCACAAAATTTCAAATTGTTTTCTAGATTTGAACGTCCCAGCAGAAGAGAACGAACTGCAATTCATGGATGATGGAAACCCTGAAGGTGTCTCAACTGCAAAACAAAACCCCTGGTTGCAAGAATTGTATAATCAGGTTGATGGAACAATCATCCTGAAACCATACAATTTTGATGCACTTGCAGATAAAGTGTTAAAAATTATCCGAATGAGCTTTCACAAGATTCTCGGATCTGAGTGCTCACTACAGGTAGAGTCAGAAGTCATGGAACAGTTACTTGCAGCTGCATATGTCTCAGAAGGGGATATGGAAGTGGAGGATTGGGTGGAGCAAGTTCTCAGTGGAGGATTTACAGAGATACAGAGAAGGTACAGCCTCTCTGCTCGTTCTATTGTGAAACTTGCTACATGTCAGGAGCAAGATCCTGGTGTGTACCTTCTTCCCCCAAGGATAATCATTGACTGA 3267 0.4521 MPTPVGVAKQCLTPEAARALEEAVSVARRRGHPQTTSLHAVSALLSLPSSTLRDACARARNCAYSPRLQFKALELCLSVSLDRVPSTQLADDPPVSNSLMAAIKRSQANQRRQPDNFNIYNQILPQPTSVSCVKVELQHLILSILDDPVVSRVFGEAGFRNSEIKIAILRPLPQLLRYSRSRVPPIFLCNLTEHPDPGRRSFSFPFTGSFGTCDGGADNYKRIGDVLCRSRGRNPLLLGVCADDALHSFTEDVNKQRDVALPVELSGLRVICIGKDISKFVFENCDNETFSSRLKEIAETIEQGVGPGLVVNFGELKYLIDENASNEAVNYVVAELVKLLELNYGKFWLMGAAASYESYLTFVARFPSIEKDWDLQLLPITSTRPQDESHQRPRYSLMDSFVPFGGLFSSPSDLKGPPQGSYYCVPRCLQCGESCVQEVLPASNERLSALAADSYHSDLPPWLRAADLGITKGLNYKTKEDNVRLDTSESGPIKKLDKTCQHLHNSQQSSEAIPCQTVMSFRCSDGEKADVDNHSNKISDASPGGVHIDLNSSVPLAEETISTPHSSSPVPVVSKEKPEKHISKALEMFQKAKKLESGDLRSCNMSNSSMCDGSQLSPSSVTSVTTDLGIGICISPISNKSQKPTMGGPKEIASPLSPNHNLVNRDVFKHPAHSSSCLSSDHSGQYDLRNPKILFEALAKKVTGQDDALQSIVKTISYCETSRGKCLGGSQREGIWMNFVGTDRIGKKKIAVSLAEILYGSQASFISVDLNSEEINGHDVKFRGKTVVDVLVGELCKNPLSVVFLDNVDKADMMDQNSLSQAVKTGKIIGSCGREVGVNNAIIVTSFSVQEDNLNCTPKTEFSSYSEERVSRTKGTPIKMKVEHVIGDIRSPSLAVLKCSTKGIPNPILVNKRKLSCDNALNGHHKSSEMAKRAHKISNCFLDLNVPAEENELQFMDDGNPEGVSTAKQNPWLQELYNQVDGTIILKPYNFDALADKVLKIIRMSFHKILGSECSLQVESEVMEQLLAAAYVSEGDMEVEDWVEQVLSGGFTEIQRRYSLSARSIVKLATCQEQDPGVYLLPPRIIID 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1563 1088 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 692 849 IPR027417 -
Alju07g1563 1088 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
Alju07g1563 1088 Gene3D - 10 170 IPR036628 -
Alju07g1563 1088 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 3 1054 - -
Alju07g1563 1088 Gene3D - 667 891 IPR027417 -
Alju07g1563 1088 ProSiteProfiles Clp repeat (R) domain profile. 7 174 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1563 Alju-ChrAlju07 41781706 41787670 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1563 07 41781706 41787670 Alju07g1563 07 41781706 41787670 CCT
Alju07g1563 07 41781706 41787670 Alju07g1563 07 41781706 41787670 ECH
Alju08g1559 08 12279565 12284052 Alju07g1563 07 41781706 41787670 ECH
Alju07g0757 07 12274287 12278722 Alju07g1563 07 41781706 41787670 ECH
Alju07g1563 07 41781706 41787670 Alju08g1559 08 12279565 12284052 ECH
Alju07g1563 07 41781706 41787670 Alju07g0757 07 12274287 12278722 ECH