Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0757 ATGCCGACGCCGGTCAACGCAGCTAGGCAATGCTTGACGGAGGAAGCGGCTCGTGCTCTTGACGATGCGGTGGCAGTTGCTCGTCGCCGCAACCACGCGCAGACTACCTCGCTTCACGCTGTATCTGCCTTGCTCGCCTTGCCGTCCTCCAAGCTCCGGGAAGCTTGCACACGCGCCGGGAGCTCCTGCTACTCGCCGAGGCTCCAGTTAAAAGCTCTAGAACTTTCCGTAGGCATCTCGCTAGACCGGTTATCTACTTCCAAAGAACTCGAGGAAGATCCTCCTGTGTCGAATTCTCTCATGGCCGCCATCAAACGGTCCCAAGCTAACCAGAGGAGGCACCCGGAGAACTTCCATTTGTTTCAGATGCATAGTCTGCAGAATCAGCAGCAGCCAACGGCATCGTTATTGAAAGTCGAACTCAAGCACTTCGTCTTATCGATTCTCGATGATCCAATTGTGAGTAGGGTTTTTGGCGACGCCGGATTTAGGAGTTGCGATGTCAAGCTCTCGTTGCTTCAGCCGCCGGTGACACAAACTTCTCGGTTTTCCCGGAGCCGGCCCCCACCCATTTTCTTGTGCAATTTGCCCGGTTCTGAATCTGGTCCGCCCGGTTTCAAGTTTCCTTTCGTGGGAAATTCTGGAAACGAAGGCTTGGATGGGAATTGTAGAAGAATCAGGGAGGTTCTTGTTAGAAAAACGAGGAGAAACCCCTTGTTGATAGGCATTTACGCGAAAAATGCTCTCCGGAGTTTTACAGAGTCGGTACAGAAATGTCGAGAGGGAGTGTTGCCAGCCGGAATAGCTGGGTTGAATATACTCAGCATTGAGAAGGAAATTTCTCAGACTCTTAGTGAAGCTAAAAGTGAAGAGAAGATGGGTTTGAAATTTCAGGAACTGAGTCGTTCATTGGATCAATGCTCTGGTCCAGGGATTGCGGTGAACTTCGGAGAGCTTGACGAGTTCGTGCGTGACGGCGTGCCTCGTGGTGCTGCGAACTTTGTTGTTTCACAGTTGACAAGGTTATTGAAAGTTCATGGTGCGAAAATTTGGGTGGTTGGGGTAGCTGGAACCTCAGATGTGTATTCTAAGTTTGTAGCTCTGTTTCCTACTATAGAAAAGGATTGGGATCTATATCTACTCACTATCACATCTACCACTCCTTCAATAGAAGGACTCTACCCTAAGTCCAGCTTGATGGGGTCCTTTGTTCCTTTTGGTGGGTTCTTCTCTTCACCTTCTGAATTCAAAAGCCCGCTAAGCTGTACAAATCAAAGTTTTACGCGATGTCACTCCTGTGATCAAAAGTATGAACAAGAAGTCGCCGATATTCTAAAAGTAGGTCCAGCGACTTCGGCATGTGGTTCCCCCACAAGCTTGCCTTGGTTACAAAATGCTAGTGTGGAGACAGATCAAGGATTGGACGTGGAAAAGAGTAATGAAGAAAATACAAGTATGGGTGCCAAGATCTTTGGATTGCAAAAGAAATGGAATGACTTTTGTGAGAGACTTCATCAAACCCGGTCAATACCTGAAGTTGGTACATCCCGAACAATGTCTAAAGTTCCAATCCTTGGGGGCTTTCCATTTAGTTCAAGTTTAAAAGAAAGTAGCTGTAAGCATCCATCTTTTAATGAAAGCCAATATTCTCATGATGTTGCTAGTGTTCCTAGTTCATCTGACCAGGTTGCTGAATTTTCAGAGATTCAGCACACTGATAAGCTCCCTTGGATTAACCCTTCCTCTAAGGCCAGTACTATGCTTGACGGTAGATCATCTTCTTCCCTTACTTCTGTGACCACAGATTTGGGATTGGGGACAATTTATGCATCAGCTACTCGGGAGCCAAATACCCAGGAACTCCAAAATCATGAAGAGCGCCTTCAGGATTTGAATGATAATGATATAAACCAAATTGCCGGATCCTCTTCATGCTGTGGTCCCAGATTGGAAGGTAACTTTAACTCGGTAGATTTCAAGTCTCTTAGTCAAGTTCTCACTGAGAGGGTTGGATGGCAAGTTGAGGCTATATCTGCTATCATTCAAGCCTTGTCCCTTTGCAAGTCTGGCAGAGGAAAGCATCATAGCATACGTGTTAGAACAGATATATGGTTTGCTTTCGTCGGACCTGATAGATTTGGGAAGAGAAAAATTGCTTCAATACTTGCAAAGACAATATTTGGAAATGCAGAAAGCTTGATCTCTTTGGATTTGAATTCCCAGGACAGGGCATACCAACTAAACTCAATATTTGAAAGCCAGAATTCGAATTATTACGACCTGAGGAGGAAAACAGATGTGGGCTTTATTGCCGGGGAGTTGAGTAAGAAACCCCGTGCAGTTGTCTTTCTTGAAAATGTAGATAAAGCTGATCTTTTGGTGCAGGATAGTTTGTTTCAGGCACTGAGAACTGGTAAATTTCCAGACTCACATGGAAGGAAAATCAGCATTCATAATGCAATATTTATTGTAAGCTCAACTGTCTCTAAAGATACTGATGGCACTTTCCTTTTAGAAAAGGAGCCTGCAATGTTTTCTGAGGAAAGAATCCATGAAGCTAAAAGATTTCAAATGCAATTACTACTGAGAGATATTTCTGAGGATGCAAAAGGAAGCTGTGGTCCAAATGTTATTGTTACACCAAGAAAAGGGTCCTCTAAACAGACATTTCTGAACAAAAGAAAACAGATTGAAATCAGTGACGACCAAGAGCAAGCAACAAGCAGCAAGATACAGAAACAAGCCCGAGACTCATCGAGATCCTTTTTGGATCTAAATATGCCTGTAGAGGAGGTTGAAGATGACATGGATCAAAATGACAATGAGAGTCAATCCAGACAGGAAGGCTGTGAAGCCTGGTTAAATGATTTCTGTGATCGAACTGATGAAAAAGTGGATTTCAAGCCATTAAATTTTGACATGCTTGCCGAGAAAATACTAAAAATCATTAGCACACGATTCAAAAGGGCATTGGGATCACAATTTCTGCTGGAAATCGATTACGAAGTAATGACACAAATACTCGCAGCCGCCTGTTTATCGGACGAGGAAAATGCAGTGGAGGATTGGATTGAACATGTGCTTGTCAAAAGCTTCAATGAAGCCAAGAAGAAATATCACCCCTCAACTAAGTTTGGAATGAAACTGGTTCCCTGTGAAGGCATTCTTGTGGAAGAGCAAGTTCCTGGAGTGTGCCTTCCAGCTAGAATTAACTTGGACTAA 3222 0.4441 MPTPVNAARQCLTEEAARALDDAVAVARRRNHAQTTSLHAVSALLALPSSKLREACTRAGSSCYSPRLQLKALELSVGISLDRLSTSKELEEDPPVSNSLMAAIKRSQANQRRHPENFHLFQMHSLQNQQQPTASLLKVELKHFVLSILDDPIVSRVFGDAGFRSCDVKLSLLQPPVTQTSRFSRSRPPPIFLCNLPGSESGPPGFKFPFVGNSGNEGLDGNCRRIREVLVRKTRRNPLLIGIYAKNALRSFTESVQKCREGVLPAGIAGLNILSIEKEISQTLSEAKSEEKMGLKFQELSRSLDQCSGPGIAVNFGELDEFVRDGVPRGAANFVVSQLTRLLKVHGAKIWVVGVAGTSDVYSKFVALFPTIEKDWDLYLLTITSTTPSIEGLYPKSSLMGSFVPFGGFFSSPSEFKSPLSCTNQSFTRCHSCDQKYEQEVADILKVGPATSACGSPTSLPWLQNASVETDQGLDVEKSNEENTSMGAKIFGLQKKWNDFCERLHQTRSIPEVGTSRTMSKVPILGGFPFSSSLKESSCKHPSFNESQYSHDVASVPSSSDQVAEFSEIQHTDKLPWINPSSKASTMLDGRSSSSLTSVTTDLGLGTIYASATREPNTQELQNHEERLQDLNDNDINQIAGSSSCCGPRLEGNFNSVDFKSLSQVLTERVGWQVEAISAIIQALSLCKSGRGKHHSIRVRTDIWFAFVGPDRFGKRKIASILAKTIFGNAESLISLDLNSQDRAYQLNSIFESQNSNYYDLRRKTDVGFIAGELSKKPRAVVFLENVDKADLLVQDSLFQALRTGKFPDSHGRKISIHNAIFIVSSTVSKDTDGTFLLEKEPAMFSEERIHEAKRFQMQLLLRDISEDAKGSCGPNVIVTPRKGSSKQTFLNKRKQIEISDDQEQATSSKIQKQARDSSRSFLDLNMPVEEVEDDMDQNDNESQSRQEGCEAWLNDFCDRTDEKVDFKPLNFDMLAEKILKIISTRFKRALGSQFLLEIDYEVMTQILAAACLSDEENAVEDWIEHVLVKSFNEAKKKYHPSTKFGMKLVPCEGILVEEQVPGVCLPARINLD 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0757 1073 CDD RecA-like_ClpB_Hsp104-like 658 826 - -
Alju07g0757 1073 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 1010 IPR027417 -
Alju07g0757 1073 Gene3D - 10 174 IPR036628 -
Alju07g0757 1073 MobiDBLite consensus disorder prediction 902 918 - -
Alju07g0757 1073 Pfam AAA domain (Cdc48 subfamily) 704 834 IPR003959 GO:0005524|GO:0016887
Alju07g0757 1073 Coils Coil 614 634 - -
Alju07g0757 1073 Gene3D - 631 878 IPR027417 -
Alju07g0757 1073 ProSiteProfiles Clp repeat (R) domain profile. 8 180 IPR004176 -
Alju07g0757 1073 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1037 - -
Alju07g0757 1073 MobiDBLite consensus disorder prediction 896 918 - -
Alju07g0757 1073 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0757 Alju-ChrAlju07 12274287 12278722 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1559 08 12279565 12284052 Alju07g0757 07 12274287 12278722 CCT
Alju07g0757 07 12274287 12278722 Alju07g0757 07 12274287 12278722 ECH
Alju07g0757 07 12274287 12278722 Alju07g1563 07 41781706 41787670 ECH
Alju08g1559 08 12279565 12284052 Alju07g0757 07 12274287 12278722 ECH
Alju07g1563 07 41781706 41787670 Alju07g0757 07 12274287 12278722 ECH