Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g02959 ATGAGCAAGTTCATAGTGATATTATATGTTGTATGTTTAGCTGCTTCTGGGTTTGTTAATGGATCTATCATCAAGAAGGAGAAAGACCAAATTAGGGTCTTTGAATTAAAGAAGGGTGACCTTACTTTGAAGGTCACCAACTGGGGTGCCACACTTATTTCCTTACTACTTCCTGACAAATACGGAAAGTTGGGAGACATTGTTCTTGGATATGACTCTCCCAAGGCATACACTAATGATACACAATATTTTGGAGCTACCGTTGGCAGGGTCGCTAACAGAATTGGAGGAGCTCAGTTTACATTAAATGGAATCCATTACAAGTTAATTGCTAATGAAGGAAACAATACACTTCATGGTGGACCTAGAGGATTTAGTGATGTGCTTTGGAAAGTGGTAAAGTATCAAAGAGATGGTGACAGACCCAAAATCAAATTCAGCTACCACAGTTTTGATGGTGAAGAAGGATTTCCGGGTGACCTATTGGTAACAGTGAGCTACATCCTAAGTGAAGAATCGAGTTTGAGCATAGTCATGAAAGCAAAAGCCTTAAACAAAGCAACACCAGTGAACCTGGTTAACCATGCATATTGGAACCTAGGAAACCACAACAGCGGCAACATCCTTAATCAAGTTGTTCAAATCTTCGGGTCCAAATTCACACCGCTCAACGACCAGCTCATTCCCTTCGGAAACTTCTCGTCCGTCAAAGGAACCCCATATGATTTCCTTAAACCACAAGTTGTTGGCTCTAGGATCGACCAATTAACCAACACCAATGGCTATAACGTAAATTATGTTCTTGATAAGAATAAGAATGACGACAACGAGGTTAAGGTTGCGGCTATTGTCACGGATAAGAGGTCAGGGAGAGTGATGAAGATTGCGACGAATCAACCAGGATTGCAATTCTACACTGCGAATTATGTGAAGAATGAGAAGGGGAAAGACGGGTTTGTGTATCAGCCACGATCGGCGTTGTGTTTGGAGACTCAAGCGTTCCCTGACTCCGTCAACCATCCCAATTTTCCGTCAACCATTGTCACGCCGGAAAAGCCTTACAACCATCTTCTGTTCTTCAAATTCTCCACCAATGCTCCACATGGTTTTTAA 1113 0.4205 MSKFIVILYVVCLAASGFVNGSIIKKEKDQIRVFELKKGDLTLKVTNWGATLISLLLPDKYGKLGDIVLGYDSPKAYTNDTQYFGATVGRVANRIGGAQFTLNGIHYKLIANEGNNTLHGGPRGFSDVLWKVVKYQRDGDRPKIKFSYHSFDGEEGFPGDLLVTVSYILSEESSLSIVMKAKALNKATPVNLVNHAYWNLGNHNSGNILNQVVQIFGSKFTPLNDQLIPFGNFSSVKGTPYDFLKPQVVGSRIDQLTNTNGYNVNYVLDKNKNDDNEVKVAAIVTDKRSGRVMKIATNQPGLQFYTANYVKNEKGKDGFVYQPRSALCLETQAFPDSVNHPNFPSTIVTPEKPYNHLLFFKFSTNAPHGF 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g02959 370 Pfam Aldose 1-epimerase 33 356 IPR008183 GO:0005975|GO:0016853
Aip10g02959 370 SUPERFAMILY Galactose mutarotase-like 26 363 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aip10g02959 370 PANTHER ALDOSE 1-EPIMERASE 1 367 - -
Aip10g02959 370 CDD galactose_mutarotase_like 37 362 - -
Aip10g02959 370 PIRSF GALM 19 365 IPR015443 GO:0016853|GO:0019318
Aip10g02959 370 Gene3D - 22 365 IPR014718 GO:0030246
Aip10g02959 370 PANTHER ALDOSE-1-EPIMERASE 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g02959 Aip-Chr10 125339854 125345301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g02959 27 363 Miscellaneous Gene Families AT5G15140 54.896 5.27e-132 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g02959 K01785 - gmx:100779602 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02077 01 112097915 112100107 Aip10g02959 10 125339854 125345301 ECH
Aip10g02959 10 125339854 125345301 Aip10g02959 10 125339854 125345301 ECH
Aip10g02959 10 125339854 125345301 Aip04g03259 04 126724029 126727823 PCT