Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g02077 ATGGCTAAGGTATCAATGTTGTTTTCCTTTCTTCTGGGTTTGGTGCTCCTTTCCCAAGCACATGGAAGTGGCGAGAAGATTGGGTTTTATGAACTTAGAAGAGGAGATTTTGAGATGAGAGTCACGAATTATGGTGCTACCGTTCTATCTGTTGTGCTTCCTGATAGAAATGGAAATTTGGCTGATGTTGTTCTTGGTTACGATTCTATTAAGTCTTATGCGAATGATACAACTTACTTTGGAGGGCTCATCGGACGAGTGGCAAATAGAATCGGAAATGCTGAATTCACTTTGGATGGCAAAACCTACAAATTGCCAGCTAATGATCATGGCAACACACTCCACGGCGGTTTCAAAGGGTTCAATAATGTTATTTGGACTGTAACATCCTACAAGAGAGACAGTCACATAACATTCCACTACAACAGTTATGACAATGAGCAAGGATTTCCTGGAAAACTTGAGGTGGATGTGACTTACATGTTGATGGATACAAACAAATTGGTTGTGAAAATGATTGCAAAAGCAATAGACAAAGACACACCGGTGAACTTAGCACAGCATACATACTGGAATATGAGAGGCCACAACACAGGCGACGTTCTTTCGCACAGAGTTCAAATCTTTGCATCCAAAATCACTCCGGTCAACGAAAAACTCATCCCTACCGGAAACCTTCAATCCGTGAAGGGCACTCCATACGACTTCCGTCGGCCAAAGGAAGTCGGAAAACAGATCGACGATCTGCCCGGTCTCTACGATATCAACTTCGCCGTAGACAGGAAAAGCAAGAAACACTTGAACAAAGTTGCCGTAGTGAGGGATCCAGTGTCCGGGAGGCAAATGGAGTTGTGGTCAAACCAGGTTGGAGTGCAGTTCTACACAAGTGGAATGTTGAATAACACCATTGGAGGCAAGGATGGTGCTGTTTACAAAAAGCATGCTGGTATTGCTTTGGAGACACAGGGGTTTCCTGATTCTGTTAATCATCCGAATTTTCCTTCTCAAATTGTTCGTCCTGGACAGATTTATCAACACTACATGGTTTATAGGTTCACTGCTTATTAA 1068 0.4288 MAKVSMLFSFLLGLVLLSQAHGSGEKIGFYELRRGDFEMRVTNYGATVLSVVLPDRNGNLADVVLGYDSIKSYANDTTYFGGLIGRVANRIGNAEFTLDGKTYKLPANDHGNTLHGGFKGFNNVIWTVTSYKRDSHITFHYNSYDNEQGFPGKLEVDVTYMLMDTNKLVVKMIAKAIDKDTPVNLAQHTYWNMRGHNTGDVLSHRVQIFASKITPVNEKLIPTGNLQSVKGTPYDFRRPKEVGKQIDDLPGLYDINFAVDRKSKKHLNKVAVVRDPVSGRQMELWSNQVGVQFYTSGMLNNTIGGKDGAVYKKHAGIALETQGFPDSVNHPNFPSQIVRPGQIYQHYMVYRFTAY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g02077 355 PANTHER ALDOSE 1-EPIMERASE 2 354 - -
Aip01g02077 355 Pfam Aldose 1-epimerase 30 351 IPR008183 GO:0005975|GO:0016853
Aip01g02077 355 PANTHER ALDOSE-1-EPIMERASE 2 354 - -
Aip01g02077 355 Gene3D - 18 354 IPR014718 GO:0030246
Aip01g02077 355 CDD galactose_mutarotase_like 30 352 - -
Aip01g02077 355 SUPERFAMILY Galactose mutarotase-like 23 352 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aip01g02077 355 PIRSF GALM 17 355 IPR015443 GO:0016853|GO:0019318
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g02077 Aip-Chr1 112097915 112100107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip01g02077 11 355 Miscellaneous Gene Families AT3G47800 57.681 1.75e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g02077 K01785 - gmx:102659620 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g02077 01 112097915 112100107 Aip10g02959 10 125339854 125345301 ECH
Aip01g02077 01 112097915 112100107 Aip01g02077 01 112097915 112100107 ECH