Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03259 ATGACCAAGATCTCTGTATTGCTCCTATGTCTCTTCTTCTTCTCAGCTTCAGGGCTTGTGAATGGTTCTTCCAAGCATCAAAAGATTGGGGTTTTTGAGCTCAAGAAAGGTGACCTTTCTTTGAAGGTTACCAATTGGGGTGCAACAATTTTGTCTCTCATCCTTCCTGATAAGAATGGAAAGTTGGGTGATGTTATTCTTGGATATAAGTCAATCAAGGATTACACTAATGGTACAACTTACTTTGGTGCTACTGTTGGGCGAGTTGCAAACAGAATTGGAGGAGCTCAGTTTACTCTAAACGGAGTTCATTACAAATTAGTTGCTAATGAAGGAAACAATACACTTCATGGTGGAACCAGAGGATTCAATGATGTTCTTTGGAAAGTGGAAAGCTACAAAAGAAATGCCAAGAACCCAAGTATTACCTTCAGTTACCATAGTTTTGATGGTGAAGAAGGATTCCCTGGTGATCTCATAGTTACTGTGAGCTACATTCTAAGTGGGAAAAACCATTTGGCCATAGTGATGAAAGCAAAAGCATTAAACAAAGCCACCCCAGTGAACTTAGCCAACCATGCTTATTGGAACCTAGGAGGTCAAAACAGTGGCAACATTCTTGACGAGGTTGTCCAAATCTTTGGTTCAAAGATCACAGTTGTTGATAGCAAACTGATTCCCACAGGAAAATTTGCTTCAGTGAAAGGAACACCCTATGATTTTCTGAAGCCACAAGTTGTTGGAAGCAGGATTAACAAGCTAGCTTCAACAAAAGGCTATGACATCAACTATGTTCTTGATAGTGAGAAGAAAATCAAGCTAGCAGCAATAGTTAAGGATCATAAATCAGGCAGGGTGTTGGAACTTTACACAAATGCCCCTGGTTTGCAGTTTTATACTGGGAACTACCTTAGTAATTTGAAGGGTAAAGGTGGATATGTGTATCAATCTCATGCTGGATTGTGTTTGGAGAGTCAAGCTTTTCCTGATTCAGTGAATCACCCAAATTTCCCTTCAACTATTGTCACCCCTCAAAAGCCTTACAAGCATCTTATGCTCTTCAAATTTTCCACATATTAG 1080 0.3972 MTKISVLLLCLFFFSASGLVNGSSKHQKIGVFELKKGDLSLKVTNWGATILSLILPDKNGKLGDVILGYKSIKDYTNGTTYFGATVGRVANRIGGAQFTLNGVHYKLVANEGNNTLHGGTRGFNDVLWKVESYKRNAKNPSITFSYHSFDGEEGFPGDLIVTVSYILSGKNHLAIVMKAKALNKATPVNLANHAYWNLGGQNSGNILDEVVQIFGSKITVVDSKLIPTGKFASVKGTPYDFLKPQVVGSRINKLASTKGYDINYVLDSEKKIKLAAIVKDHKSGRVLELYTNAPGLQFYTGNYLSNLKGKGGYVYQSHAGLCLESQAFPDSVNHPNFPSTIVTPQKPYKHLMLFKFSTY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03259 359 Pfam Aldose 1-epimerase 32 354 IPR008183 GO:0005975|GO:0016853
Aip04g03259 359 PANTHER ALDOSE 1-EPIMERASE 1 358 - -
Aip04g03259 359 SUPERFAMILY Galactose mutarotase-like 25 357 IPR011013 GO:0003824|GO:0005975|GO:0030246
Aip04g03259 359 PANTHER ALDOSE-1-EPIMERASE 1 358 - -
Aip04g03259 359 Gene3D - 20 358 IPR014718 GO:0030246
Aip04g03259 359 CDD galactose_mutarotase_like 32 356 - -
Aip04g03259 359 PIRSF GALM 16 359 IPR015443 GO:0016853|GO:0019318
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03259 Aip-Chr4 126724029 126727823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03259 27 357 Miscellaneous Gene Families AT5G15140 57.958 3.00e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03259 K01785 - gmx:100798975 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g02959 10 125339854 125345301 Aip04g03259 04 126724029 126727823 PCT