Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01421 ATGCAGGAGAACCGTCGATTCACATACTTTCAGCACGAACTGGCTAACTCTCAGGGAGCGTTGTTGGTGGAAGCTGCTGACTCCAGCAACATTAAGCTGGTCCGAGCACTTTATGACGCCCTAAGCGCGCGTGACTCCCACGCGGTTCTCAAGCTCGTGGCCTCAGACCTCGAGTGGTGGTTCCATGGTCCACCCTCCTGCCAGTTCTTGAAGCTCCTGCTCACCGGAGAATCCTCCTCTTCCTCCTCCGCTTCCACCGCCGCTGATTCATTCGAGTTCGTTCCGCTTTCAGTCGTATCCTTCGGCAGCACCGTTATCGCCGAGGGCTGCGACACCGCGCGCTCCGTCGTTTGGGTCCACGCCTGGACTGTCACGGATGGGATAATTACTCAGGTCAGGGAGTACTTCAACACTTCCTTGACCGTTACCAAGATCGGAGATTCTGATTCTGATTCCGATTCTGAGATTATTCCGGCGAGTTCTGACTCTGGCAACTTTCCTTGCGTCTGGCAGAGCAGCCTCTCCGGTCTCGCCGGAAAATCGGTCCCCGGTCTTGTCCTGGCAATATAA 570 0.5579 MQENRRFTYFQHELANSQGALLVEAADSSNIKLVRALYDALSARDSHAVLKLVASDLEWWFHGPPSCQFLKLLLTGESSSSSSASTAADSFEFVPLSVVSFGSTVIAEGCDTARSVVWVHAWTVTDGIITQVREYFNTSLTVTKIGDSDSDSDSEIIPASSDSGNFPCVWQSSLSGLAGKSVPGLVLAI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01421 189 SUPERFAMILY NTF2-like 29 143 IPR032710 -
Aip10g01421 189 Gene3D - 22 146 - -
Aip10g01421 189 Pfam Wound-induced protein WI12 85 189 IPR009798 -
Aip10g01421 189 PANTHER SENESCENCE ASSOCIATED GENE 20 22 189 - -
Aip10g01421 189 PANTHER OS07G0691300 PROTEIN 22 189 IPR009798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01421 Aip-Chr10 24410492 24413895 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01421 - - adu:110276786 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01342 07 22148487 22148972 Aip10g01421 10 24410492 24413895 ECH
Aip04g02325 04 106193747 106194256 Aip10g01421 10 24410492 24413895 ECH
Aip02g02429 02 97771783 97772253 Aip10g01421 10 24410492 24413895 ECH
Aip01g00308 01 3308058 3309008 Aip10g01421 10 24410492 24413895 ECH
Aip10g01421 10 24410492 24413895 Aip10g01421 10 24410492 24413895 ECH