Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00308 ATGCTAATTTATATAGCTTTTAAAGAAGAGTCAAAGGCATGCCTAGGGCAATTAGGGGAAAGAAACAAAAGAGTGGTGAGGGACTTCTACAAAGCCTTAACCTCCAAAGACACACAAACACTTTATGGGCTTGTGGCTCAAGACTTGGAGTGGTGGTTCCATGGACCACCATGCCATCGCCACCACTTGGTTCCATGGCTGACTGGATCCTCACCATCGCCACCGTCTTTGGTTCCTGATCTCGTCGTAGGGTTCGGCTCAGTTGTTGTGGCCGAAGGGTACGACGAGACCAATTTAATCTGGTGGGTGCACGCATGGACCGTTAATGAAAATGGTGTCATCACTCAAGTTAGAGAATATGTGAACACTGCCCTAACAGTGACTCAACTTGGTGTTGCCACGTCACCATCACAGGCAGTGCAAAATGCCTCTAAATGCTTTAGCATTTGGAAAAGCACTCTTTCGGATGAGTCCGTACCTGGACTCATTCTAACAATTTAG 501 0.4691 MLIYIAFKEESKACLGQLGERNKRVVRDFYKALTSKDTQTLYGLVAQDLEWWFHGPPCHRHHLVPWLTGSSPSPPSLVPDLVVGFGSVVVAEGYDETNLIWWVHAWTVNENGVITQVREYVNTALTVTQLGVATSPSQAVQNASKCFSIWKSTLSDESVPGLILTI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00308 166 Gene3D - 21 138 - -
Aip01g00308 166 PANTHER OS07G0691300 PROTEIN 10 166 IPR009798 -
Aip01g00308 166 SUPERFAMILY NTF2-like 20 132 IPR032710 -
Aip01g00308 166 Pfam Wound-induced protein WI12 68 166 IPR009798 -
Aip01g00308 166 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 10 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00308 Aip-Chr1 3308058 3309008 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00308 - - gmx:102664858 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g00308 01 3308058 3309008 Aip01g00308 01 3308058 3309008 ECH
Aip01g00308 01 3308058 3309008 Aip07g01342 07 22148487 22148972 ECH
Aip01g00308 01 3308058 3309008 Aip10g01421 10 24410492 24413895 ECH
Aip07g01342 07 22148487 22148972 Aip01g00308 01 3308058 3309008 ECH
Aip04g02325 04 106193747 106194256 Aip01g00308 01 3308058 3309008 ECH
Aip02g02429 02 97771783 97772253 Aip01g00308 01 3308058 3309008 ECH