Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01342 ATGGTGGTGCCTGAAATAATAGAGGAAAAAGAGCGCAACAAGAGAATCATCAGAGACTTATACAAAGCCATAATCTCCAAAGACGCGGACAAATTGCATCTCCTTCTTGCCCCAAACTTAGAATGGTGGTTCCATGGCCCACAACGTCATCGCCACCATTTGATTCCGTTGCTAACATGCACTTCTTCTTCAGCATCATCATCAAACCCTTTTGTTCCTCATCTCATAGAAGAGTTTGGATTGGTGATTATCGCTGAAGGGTACGATAAGGTGAACAACGTGTGGTGGGTGCATGCATGGACTATTACCGTTGACGGGGTCATTACTCAGATCAGAGAGTATCTCAACACTTCGGTGATTGTCACTAAGCTTAGGAAGCATTTGGATGCTGATGATGATGATGCTTGTTACTCTTCCATGGGTCATTGCGTTTGGAAGAGCAAGCTCGTTGATGACTCTGTGCCTGGAATTATTCTTGCAATATAG 486 0.4403 MVVPEIIEEKERNKRIIRDLYKAIISKDADKLHLLLAPNLEWWFHGPQRHRHHLIPLLTCTSSSASSSNPFVPHLIEEFGLVIIAEGYDKVNNVWWVHAWTITVDGVITQIREYLNTSVIVTKLRKHLDADDDDACYSSMGHCVWKSKLVDDSVPGIILAI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01342 161 Pfam Wound-induced protein WI12 57 161 IPR009798 -
Aip07g01342 161 PANTHER OS07G0691300 PROTEIN 7 161 IPR009798 -
Aip07g01342 161 Gene3D - 5 126 - -
Aip07g01342 161 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 7 161 - -
Aip07g01342 161 SUPERFAMILY NTF2-like 11 122 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01342 Aip-Chr7 22148487 22148972 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01342 - - var:108336652 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01342 07 22148487 22148972 Aip07g01342 07 22148487 22148972 ECH
Aip07g01342 07 22148487 22148972 Aip10g01421 10 24410492 24413895 ECH
Aip04g02325 04 106193747 106194256 Aip07g01342 07 22148487 22148972 ECH
Aip02g02429 02 97771783 97772253 Aip07g01342 07 22148487 22148972 ECH
Aip01g00308 01 3308058 3309008 Aip07g01342 07 22148487 22148972 ECH
Aip07g01342 07 22148487 22148972 Aip01g00308 01 3308058 3309008 ECH