Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g00350 ATGTCCACCGCCCAACTGCAAAACGACTTCTCTTCAGCTCAACCCTCATCATCTTCTAGACCCGCAGCCGATCAACATCACCACCCCCAGCCGCCTCAACACGCGTCTTCTGCAACCGTGGCGGCTCCTTTGAGCCGCTACGAGTCACAAAAGAAGCGAGACTGGAACACGTTCGGGCAGTATCTGAAGAATCAGACACCGCCGGTGTCCCTGTCTCAGTGCAATTTCAACCACGTGCTCGAATTCCTCCGTTACCTTGACCAATTTGGCAAGACTAAGGTTCACATGAACGGTTGCATCTTTTTTGGGCAGCCTGACCCTCCGGCCCCGTGCACCTGCCCTCTCAGGCAGGCGTGGGGTAGCCTAGACGCCCTCATAGGGCGTCTGAGAGCTGCCTACGAGGAGCACGGAGGCTCCCCGGAGTCAAACCCCTTCGGAAGCGGAGCTATTAGGGTGTACCTTCGTGAGGTGAAGGAGTGCCAGGCAAAGGCAAGAGGGATCCCTTACACCAAGAAGAAGAAGAAGAGGAGCAGCCAGATTAAGGGGATTAGCAATCACGACACTACTGCCTCAAAGTCTTTGAAGCAATTGGCTTCTTGA 600 0.5517 MSTAQLQNDFSSAQPSSSSRPAADQHHHPQPPQHASSATVAAPLSRYESQKKRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHMNGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKRSSQIKGISNHDTTASKSLKQLAS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g00350 199 MobiDBLite consensus disorder prediction 1 46 - -
Aip10g00350 199 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Aip10g00350 199 MobiDBLite consensus disorder prediction 165 199 - -
Aip10g00350 199 Pfam ALOG domain 41 159 IPR006936 -
Aip10g00350 199 MobiDBLite consensus disorder prediction 1 44 - -
Aip10g00350 199 PANTHER PROTEIN G1-LIKE2 15 186 IPR040222 -
Aip10g00350 199 MobiDBLite consensus disorder prediction 182 199 - -
Aip10g00350 199 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 15 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g00350 Aip-Chr10 3526391 3526990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g00350 - - gmx:100306082 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00350 10 3526391 3526990 Aip10g00350 10 3526391 3526990 ECH
Aip10g00350 10 3526391 3526990 Aip08g01587 08 28286791 28287360 ECH
Aip08g01587 08 28286791 28287360 Aip10g00350 10 3526391 3526990 ECH
Aip03g04662 03 130872030 130873430 Aip10g00350 10 3526391 3526990 ECH