Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04662 ATGTCTGCCGCAGTGGCCGCAGCAGCCGCTTCCGCCGCAATCTCCGGCTACCACAGCTCCTCTGGCGCCGACACCAGGAACCACCACCCGTTTACGCAACCAGAACACGGGCAACAAGTCTCCGTCCCTCTTAGCAGGTACGAGTCTCAAAAGAGGCGTGACTGGAACACGTTTGGGCAGTACCTGAAGAACCACCGTCCACCGTTAACACTGTCCCGGTGCAGCGGCGCGCACGTGCTGGAATTCCTGCGGTACTTGGACCAGTTTGGGAAGACGAAGGTGCACAGCGACACGTGTGCGTACTTTGGGAACTCTCAGCCTCCGGGGCCATGCCCGTGTCCGTTGAAGCAAGCTTGGGGAAGCCTTGATGCACTGATTGGGCGGCTGCGTGCGGCGTTTGAAGAAAACGGAGGAAACCCTGAGATGAACCCTTTCGGTGCACGCGCCGTCAGGCTTTACCTCCGTGAAGTTCGGGATGTGCAAGCCAAGGCTAGAGGTATTGCTTATGAGAAGAAGAAACGCAGAAAGAATAGTAATCATAGCCAGAATCAGAATCAGAATCAGAATGGGTCGATGATGATGATGATGGAAGATAACAACAACAATACTAATAATAACCATGGTCATTATGTTCATGATGATGTGAGTTCTAGTGGGGTGCATCATTCATCAGGGTATAATATTAATGGTGGTGGTGGAGTTTTTCATCACTTGTCAAGTTCGGATGGGACAGCTCCTCCTCTTTCATATTTCTTATCCTAG 762 0.5197 MSAAVAAAAASAAISGYHSSSGADTRNHHPFTQPEHGQQVSVPLSRYESQKRRDWNTFGQYLKNHRPPLTLSRCSGAHVLEFLRYLDQFGKTKVHSDTCAYFGNSQPPGPCPCPLKQAWGSLDALIGRLRAAFEENGGNPEMNPFGARAVRLYLREVRDVQAKARGIAYEKKKRRKNSNHSQNQNQNQNGSMMMMMEDNNNNTNNNHGHYVHDDVSSSGVHHSSGYNINGGGGVFHHLSSSDGTAPPLSYFLS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04662 253 MobiDBLite consensus disorder prediction 17 46 - -
Aip03g04662 253 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-LIKE 1 204 - -
Aip03g04662 253 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Aip03g04662 253 Coils Coil 252 253 - -
Aip03g04662 253 PANTHER PROTEIN G1-LIKE2 1 204 IPR040222 -
Aip03g04662 253 MobiDBLite consensus disorder prediction 180 209 - -
Aip03g04662 253 MobiDBLite consensus disorder prediction 167 209 - -
Aip03g04662 253 Pfam ALOG domain 42 159 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04662 Aip-Chr3 130872030 130873430 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04662 - - adu:107481719 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04662 03 130872030 130873430 Aip08g01587 08 28286791 28287360 ECH
Aip03g04662 03 130872030 130873430 Aip03g04662 03 130872030 130873430 ECH
Aip03g04662 03 130872030 130873430 Aip10g00350 10 3526391 3526990 ECH