Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01587 ATGTCCACAAGCAAAGGGAAAGATATAGTAGAGGGATCGTCAAGATCTCCTACTCATGATGGTGGTGCTAGTGATGATCGGATTCAACCGCAACATCAGTTGCCGTTGAGCCGATATGAGTCCCAAAAGAAGAGGGATTGGAACACTTTCGGCCAATACCTTAGGAACCAACGGCCTCCAGTGCCGCTTTCTCAGTGCAACTCCAGCCATGTCCTTGAATTTCTAAGGTATTTAGATCAATTCGGAAAAACAAAGGTACACTCACAAGGTTGCTTGTTTTTCGGGCAGACCGAACCACCAGGACCTTGCACATGCCCTCTCAAACAAGCCTGGGGGAGCCTTGACGCTCTCATAGGCCGATTGAGAGCGGCATATGAGGAAAATGGAGGTCTACCCGAGACAAACCCATTTGCCAGTGGAGCCATAAGAGTTTACCTACGAGAGGTTAGGGACTCACAAGCCAAAGCAAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGAAATCTAATCAATAATAAGGCCAACGGTGACACCGCTACTACCTCAAGCTTACCAGCTTTGCAGTAA 570 0.4719 MSTSKGKDIVEGSSRSPTHDGGASDDRIQPQHQLPLSRYESQKKRDWNTFGQYLRNQRPPVPLSQCNSSHVLEFLRYLDQFGKTKVHSQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNLINNKANGDTATTSSLPALQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01587 189 Pfam ALOG domain 33 151 IPR006936 -
Aip08g01587 189 MobiDBLite consensus disorder prediction 1 41 - -
Aip08g01587 189 MobiDBLite consensus disorder prediction 161 189 - -
Aip08g01587 189 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
Aip08g01587 189 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 180 - -
Aip08g01587 189 MobiDBLite consensus disorder prediction 173 189 - -
Aip08g01587 189 PANTHER PROTEIN G1-LIKE2 2 180 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01587 Aip-Chr8 28286791 28287360 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01587 - - gmx:100806493 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00350 10 3526391 3526990 Aip08g01587 08 28286791 28287360 ECH
Aip03g04662 03 130872030 130873430 Aip08g01587 08 28286791 28287360 ECH
Aip08g01587 08 28286791 28287360 Aip10g00350 10 3526391 3526990 ECH
Aip08g01587 08 28286791 28287360 Aip08g01587 08 28286791 28287360 ECH