Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01500 ATGTACCCTCTTGTTGTTGCAGTGCTACCCGATGTTCCTGAAGAGCACAGAAAGATTCTGATATCTCAAGGGTGCATTGTTAGGGAGATTGAGCCTGTGTATCCACCTGAGAACCAGACACAGTTTGCTATGGCCTATTATGTCATCAACTACTCCAAACTTCGTATTTGGGAGTTTGTGGAGTATAGTAAGATGATATATCTAGATGGTGACATTCAAGTGTTTGAGAACATTGACCACCTCTTTGACTTGCCGGATAACTACTTCTATGCTGTGATGGACTGTTTTTGTGAACCAACTTGGGGCCACACCTCGCAGTACAAGATCGGTTATTGCCAGCAATGCCCTGATAAGGTTCAATGGCCTAAGGACTTTGGTCCGAAGCCCCCACTTTATTTCAATGCTGGTATGTTCGTTTATGAACCAAATCTTGCGACCTATCATGACCTTCTTAAAACACTTCAAGTCACAAAACCTACATCTTTTGCAGAACAGGGGTCTAAACCATGGAGGTATACTGGGAAGGAAGATAACATGGACAGAGAAGACATCAAGATGCTGGTGAAAAAATGGTGGGATATATACGAAGATGAGACTTTGGATTTCAATCATCCCGTGAATTCAGAAAGGTTTAAGATGGCTATTTTGGAGTCTGGTGGTGAAATCAAGTTTGTTCCCGCGCCATCCGCAGCATAG 696 0.431 MYPLVVAVLPDVPEEHRKILISQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDNYFYAVMDCFCEPTWGHTSQYKIGYCQQCPDKVQWPKDFGPKPPLYFNAGMFVYEPNLATYHDLLKTLQVTKPTSFAEQGSKPWRYTGKEDNMDREDIKMLVKKWWDIYEDETLDFNHPVNSERFKMAILESGGEIKFVPAPSAA 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01500 231 Pfam Glycosyl transferase family 8 6 157 IPR002495 GO:0016757
Aip09g01500 231 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 167 IPR029044 -
Aip09g01500 231 SUPERFAMILY Nucleotide-diphospho-sugar transferases 3 199 IPR029044 -
Aip09g01500 231 PANTHER GLYCOGENIN SUBFAMILY MEMBER 166 231 - -
Aip09g01500 231 PANTHER GLYCOGENIN SUBFAMILY MEMBER 2 165 - -
Aip09g01500 231 PANTHER GALACTINOL SYNTHASE 2 166 231 - -
Aip09g01500 231 PANTHER GALACTINOL SYNTHASE 2 2 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01500 Aip-Chr9 28223652 28225157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01500 2 231 Glycosyltransferase AT1G56600 61.620 6.73e-124 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01500 K18819 - gmx:548050 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01500 09 28223652 28225157 Aip09g01500 09 28223652 28225157 ECH
Aip06g00735 06 9812050 9813819 Aip09g01500 09 28223652 28225157 ECH
Aip06g00858 06 11746608 11748275 Aip09g01500 09 28223652 28225157 PCT