Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00735 ATGGCACCTCCTGAGCTTGTTCCAACCGCCGCTGCTGCTTCCGCCTTCACCGCGAAAACTGCCACCACACTCCCCAGGCGAGCCTACGTCACTTTCCTCGCCGGAAATGGTGACTACGTCAAAGGTGTTGTTGGACTGGCCAAAGGCCTCCGCAAGGTCAAGTCAGCTTACCCTCTGGTGGTGGCGATCCTCCCCGACGTGCCGGAGGAGCACCGTCAGATACTTGAGTCACAAGGTTGTATAGTTCGCGAGATCGAACCGGTTTACCCTCCTGAGAACCAGACTCAGTTCGCCATGGCCTATTATGTCATCAACTACTCCAAGCTCCGTATCTGGGAGTTTGTGGAGTACAGTAAGATGATATACTTGGATGGAGACATTGAGGTATATGAGAACATAGATCACTTGTTTGATCTTCCAGATGGAAAGTTCTACGCTGTAATGGATTGCTTCTGCGAGAAGACATGGAGTCACAGCCCTCAATACAAGATCGGTTACTGCCAGCAGTGCCCTGACAAGGTGCAATGGCCTGAAGAGTTGGGTCAACCACCGTCCCTGTACTTCAACGCTGGCATGTTCGTGTTTGAGCCATCCATGGAAACTTACCACGACCTTCTCAGAAAACTCCAGATCACACCTCCTACTCCCTTTGCGGAGCAGGATTTCCTCAACATGTATTTCAAGGACATTTACCAGCCCATTCCCTTGGTTTATAACCTTGTTCTCGCCATGCTCTGGCGCCACCCTGAAAATGTTGACCTTGATAAAGTCAAAGTTGTTCACTACTGTGCAGCGGGATCCAAACCATGGAGGTATACGGGAAAGGAAGAAAATATGCAGAGGGAGGACATAAAGATGTTGGTGAAGAAATGGTGGGATGTCTATTATGATGCATCCCTTGATTACAAGAAACCGCCGCTATCCAGTGACGAAGCTGATCCATTCGTGCATGTACTTTCTGAGGCTGCCGAAGTTCACTATGTCGCTTCGGCCTCAGCTGCTTAG 1005 0.5005 MAPPELVPTAAAASAFTAKTATTLPRRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAILPDVPEEHRQILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIEVYENIDHLFDLPDGKFYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVQWPEELGQPPSLYFNAGMFVFEPSMETYHDLLRKLQITPPTPFAEQDFLNMYFKDIYQPIPLVYNLVLAMLWRHPENVDLDKVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDVYYDASLDYKKPPLSSDEADPFVHVLSEAAEVHYVASASAA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00735 334 CDD GT8_Glycogenin 27 295 - -
Aip06g00735 334 PANTHER GALACTINOL SYNTHASE 1 1 334 - -
Aip06g00735 334 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 334 - -
Aip06g00735 334 Pfam Glycosyl transferase family 8 31 273 IPR002495 GO:0016757
Aip06g00735 334 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 25 302 IPR029044 -
Aip06g00735 334 SUPERFAMILY Nucleotide-diphospho-sugar transferases 29 302 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00735 Aip-Chr6 9812050 9813819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00735 6 334 Glycosyltransferase AT1G56600 72.836 0.0 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00735 K18819 - gmx:100809287 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00735 06 9812050 9813819 Aip06g00735 06 9812050 9813819 ECH
Aip06g00735 06 9812050 9813819 Aip09g01500 09 28223652 28225157 ECH