Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g00858 ATGGCCCCTAATATGTTGACAAGTGTGACTGCCAATGGCACCATGGGTGAACAACAACGCAAAGCTTCAAGTCGTGCCTTCGTGACTTTCCTTGCTGGAAATGGTGACTACATTAAAGGAGTGGTGGGTCTGGCCAAAGGGCTGAGGAAGACTAAGACCATCTACCCTCTTGTGGTTGCTGTCCTGCCTGATGTCCCTCAAGAACACCGCAACATCCTCAAATTTCAAGGTTGCATTGTTAGAGAGATCGAACCTGTTTACCCTCCCGAGAATCAAACCCAGTTTGCCATGGCTTATTATGTCATCAACTACTCTAAGCTCCGTATTTGGGAGTTTGTGGAGTACAAGAAGATGATCTACTTAGACGGTGACATTCAAGTATTTGCCAATATTGATCACTTATTTGACCTTCCTGATAACTACTTCTACGCTGTCATGGACTGCTTTTGCGAGAAGTCATGGAGTAAAACCTCTCAGTACAAAATTGGTTATTGCCAACAATGTCCTGATAGGGTTCAATGGAAATCTGAGCTTGGTCCTAAACCTCCTCTCTATTTTAATGCTGGCATGTTTGTTTATGAGCCTAATTTGTCTACTTATTATGACNNNGATTTTCTGAATATGTATTTCAAGGAAAAGTATAAGCCTATACCTAATGTGTACAACCTTGTCTTAGCTATGTTGTGGCGTCACCCTGAGAACGTCGAACTTGAGAAAGTGAAAGTGGTTCACTATTGTGCTGCTGGGTCAAAGCCATGGAGATACACCGGCAAGGAGGAGAATATGGAAAGGAAAGACATAAAGATGTTGGTTAAGAAATGGTGGGAGATATATGAGGATGAGAAATTGGATTACAACAACGGTGTGGATCGTTTCAAGTCAGCACTTATGGAAACCCGTGGTGTTAAGTTTGTTTCAGCTCCATCTGCTGCATGA 936 0.4263 MAPNMLTSVTANGTMGEQQRKASSRAFVTFLAGNGDYIKGVVGLAKGLRKTKTIYPLVVAVLPDVPQEHRNILKFQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYKKMIYLDGDIQVFANIDHLFDLPDNYFYAVMDCFCEKSWSKTSQYKIGYCQQCPDRVQWKSELGPKPPLYFNAGMFVYEPNLSTYYDXDFLNMYFKEKYKPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYTGKEENMERKDIKMLVKKWWEIYEDEKLDYNNGVDRFKSALMETRGVKFVSAPSAA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g00858 311 CDD GT8_Glycogenin 25 280 - -
Aip06g00858 311 Pfam Glycosyl transferase family 8 29 197 IPR002495 GO:0016757
Aip06g00858 311 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 311 - -
Aip06g00858 311 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 283 IPR029044 -
Aip06g00858 311 PANTHER GALACTINOL SYNTHASE 2 1 311 - -
Aip06g00858 311 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 281 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g00858 Aip-Chr6 11746608 11748275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip06g00858 1 311 Glycosyltransferase AT1G56600 68.915 3.98e-171 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g00858 K18819 - gmx:548050 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00858 06 11746608 11748275 Aip09g01500 09 28223652 28225157 PCT