Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g00417 ATGGAAAGTAACCTACCAGTGATAGCAAAGAAAGTGTGGAACATAATACGTGTTGCCTTCTACATGTTAAGGAAGGGAATTTCAAAAGGCAAACTCATGTTAGAACTCAACATGGTTCTCAAACGCCGCCGCAAACTCGCCGGAAAAGCCATCGCCAACCTCATGATGTTCCACCACCACCAACACGCCGACATGCACCTCCAACAATTCTCCACCACCAGGGAGTACGAGTTCAGCTGCAGCAACACGCCCAATAACTTCTTCTCCAAGCTCCACCGCAAGAACAAGCTGTTCACGCGCTCCCACGCGCCTCACGAGTGCGACGACGACGTCGTGACGGTCAGTGCTGTAAAGGCGGTGTTAGAGATCCTAAACAACAACAATGATAATGTGGTCGAGGCATCCCCGGCGCTACCGGGGTTCGGCCGGAGCCCTACCGTGAGTCGGTTAAGGGTAACGGATTCACCGTTCCCAATGAATGTCGACACAGAATACGATAAAGATCATCAAGTGGACAAGGCTGCCGAAGAATTCATTAAGAGGTTCTACAAAGAGTTGAGGAAGCAACCCTAA 573 0.5044 MESNLPVIAKKVWNIIRVAFYMLRKGISKGKLMLELNMVLKRRRKLAGKAIANLMMFHHHQHADMHLQQFSTTREYEFSCSNTPNNFFSKLHRKNKLFTRSHAPHECDDDVVTVSAVKAVLEILNNNNDNVVEASPALPGFGRSPTVSRLRVTDSPFPMNVDTEYDKDHQVDKAAEEFIKRFYKELRKQP 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g00417 190 Pfam Cotton fibre expressed protein 169 189 IPR008480 -
Aip09g00417 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 189 - -
Aip09g00417 190 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g00417 Aip-Chr9 4345235 4346132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g00417 - - gmx:100802625 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00417 09 4345235 4346132 Aip08g00188 08 1241332 1244299 ECH
Aip05g03283 05 138412733 138414112 Aip09g00417 09 4345235 4346132 ECH
Aip09g00417 09 4345235 4346132 Aip09g00417 09 4345235 4346132 ECH
Aip08g00188 08 1241332 1244299 Aip09g00417 09 4345235 4346132 PCT