Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g03283 ATGGAAATTGAAGCAAGGGCAGCACCAATGGTGGCAAAGAAGCTTTTGAACATTCTAAGAATAGTTATGGTCATGTTAAGAAAAGGTATATCAAAGAGCAAACTCATTTCCGAGTTCAATCTCTTGCTCAAGCGCGGAAAGATAGCAGCCAGCAACGCAATCTCCACCACTCTCACTCTCCACCACCACTACGCCGCCGCCTTCACGCGCCGCCGTTCCTCCTTCCGCAACAACAAAAACCTCTCCTTCTACCCTCGCGAATACCAATTCAGCTGCACTAGTAGCCCTGCCTTTAATTACCACAGTCGTCGCCACCATCGCTGCCACCACCACGAAGACGTTTCAACCCTATGTAAGGTTCTTGAGATGCTAAAAGACAACAACAACAATAACAACTATGAGATGGTGATGGATTCGCCATTGATGCCATTGCCAGAGTTTGGAAAAAGCCCTAAGCAGTTGAGGATCACTGATTCCCCTTTTCCTCTCAAAGACGAAGAAGATTTTGATGATGACGATGGTGGCAAAATTGATATTAAAGCTGAAGAGTTTATTAAAAGGTTTTATAAGAATCTTCACTCACAACACACAAATTCTCCTTATTATTACTCTTGGGACCGataa 624 0.4407 MEIEARAAPMVAKKLLNILRIVMVMLRKGISKSKLISEFNLLLKRGKIAASNAISTTLTLHHHYAAAFTRRRSSFRNNKNLSFYPREYQFSCTSSPAFNYHSRRHHRCHHHEDVSTLCKVLEMLKDNNNNNNYEMVMDSPLMPLPEFGKSPKQLRITDSPFPLKDEEDFDDDDGGKIDIKAEEFIKRFYKNLHSQHTNSPYYYSWDR 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g03283 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 9 207 - -
Aip05g03283 207 Pfam Cotton fibre expressed protein 176 195 IPR008480 -
Aip05g03283 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN 9 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g03283 Aip-Chr5 138412733 138414112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g03283 - - gmx:100783043 165.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g03283 05 138412733 138414112 Aip09g00417 09 4345235 4346132 ECH
Aip05g03283 05 138412733 138414112 Aip08g00188 08 1241332 1244299 ECH
Aip05g03283 05 138412733 138414112 Aip05g03283 05 138412733 138414112 ECH