Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03184 ATGAAGCTTTGTTTCTTTCTCTGCCTGCTTTGTTCATTCGCATTTCTTGCTTTGGGTTCCAATGTCAGCTACGATGGTCGCTCCCTCATCATTGATGGCCAAAGGAAGCTTCTTCTCTCTGCTTCCATTCACTACCCCAGAAGTGTTCCCGCTATGTGGCCAAGTCTTGTTCAAACAGCTAAGGAAGGAGGCATAGATGTCATAGAAACCTATGTTTTCTGGAACGGTCATGAGCTTTCTCCAGGAAATTATTACTTTGGAGGACGATTCGATCTAGTCAAGTTTGTGAAGATTGTCCAGCAGGCTGGAATGCACTTGATTCTTCGGATAGGCCCGTTTGTTGCAGCGGAATGGAATTACGGTGGTGTACCGGTATGGTTGCATTATATTCCAGGCACGGTGTTCCGGACATACAATCAGCCTTTTATGTCTCATATGCAGAACTTTACAACATACATAGTAAATCTTATGAAACAAGAGAAGCTTTTTGCGTCGCAAGGGGGTCCTATCATCTTGTCCCAGGCAAAAAATGAGTACGGATACTATGAAAATTTTTATAAGGAGGACGGTAAGAAGTATGCAATGTGGGCTGCAAAGATGGCTGTTGCTCAGAATACCGGTGTCCCGTGGATAATGTGCCAGCAATGGGATGCTCCAGATCCTGTGATAGATACCTGTAACTCATTCTATTGTGACCAATTTAAACCTACTTCTCCAAATAGGCCAAAAATTTGGACCGAGAACTGGCCTGGATGGTTCAAAACTTTTGGTGGAAGAAATCCTCACCGGCCAGCTGAAGATGTGGCATATGCAGTTGCTCGTTTCTTCCAGAAAGGTGGAAGTGTGCAAAACTACTACATGTATCATGGAGGAACAAATTTCGGGCGTACAGCCGGTGGTCCATTCATTACTACAAGTTATGACTACGATGCCCCGATAGATGAGTATCAAATAAACAGGTTACCTAGATTCCCGAAATGGGGACATCTTAAGGAGCTTCACAGAGCTATCAAGTTATGTGAGCCTGTATTGCTTAATGGCAAATCAGTTAATATCACCCTTGGTCCTTCTGTGGAGGCCGATGTCTATACCGATGAATCAGGAGCATGTGCTGCCTTTATTGCAAACATTGACGACAAAAATGATAGGACGGTGGAGTTTCGCAATATGTCATATCACCTGCCGGCGTGGTCGGTTAGCATCCTTCCTGATTGCAAGAATGTAGTCTTTAACACGGCAAAGGTTTCTACTCAGACACACGTAGTTTCGATGATTGATGAGAATTTGCAGCAATCAGATAAAGGTGCAGTGACTTTCAAATGGGATGTATTGAAGGAGAATGCAGGAATCTGGGGGGAGGCAGACTTCGTTAAAACCGGTTTTGTTGACCTTATAAATACCACCAAAGATACCACTGATTATCTGTGGCACACAACAAGTATATATGTTGGTGAAAATGAAGAGTTCCTAAAGAATGGAAGCAAACCAGTTCTTCTAATAAATTCCACTGGTCATGCTCTCCATGCATTTGTGAATCAGGAGTACCAAGGTACCGGAACTGGAAATGGTACACATTCGCCATTCTTTTTCAAGAATCCTATTCCTCTGAGGCCAGGGAAGAATGAGATTGCTTTATTATGCTTGACCGTTGGCTTACCGACTGCTGGACCATTTTACGACTTCGTCGGAGCAGGACTGATAAGTGTAAAGATTAAGGGATTCAACAATGGGACAGTAGACTTGTCTTCTAGTGCCTGGAGTTACAAGATCGGAGTACAAGGAGAACAACTGAAGTTATACCAGGGAGATGGGTCGAGTAGTTTGAAGTGGACAACCACATCCAAACCACCTAAAGGGCAGGCATTAACATGGTACAAGGCCGTCGTGGATGCTCCGTCCGGGGATGAACCAATTGGATTGGATATGTTGCATATGGGAAAGGGTCTAGCTTGGTTAAATGGAGAAGAAATTGGAAGATATTGGGCTCGGAATAGCGAGTTCGAGGAAAAAGACTGTGTACAAGAATGTGACTACAGAGGCAAATTCCTCCCTGACAAATGTGACACTGATTGTGGAAAGCCTACACAGAAATGGTATCATGTTCCAAGGTCTTGGTTCAAGCCATCCGGGAACACTCTTGTTATTTTCGAGGAGAAAGGCGGAGATCCAACAAAGATTAAGTTCCTTAGGCGTAAAGTAACCGGAGCATGTGCCGATGTTGCCGAGGATTACCCTTCTATTGGACTTGATTCTCAGGGTGAAGATAAAATCAACAAGAACACTCCTTTTGCCCGTTTAACATGCCCCGGAAACACAATTATATCCTCAGTGAAATTTGCTAGCTTTGGAACCCCTACTGGAAAATGTGGATCTTACCTTTTGGGAAGTTGCCATGATCCCAATAGTAGCACAGTTGTTGAAAAGGCATGTCTAAACAAAAACGATTGCGTCGTAAAATTAGCCGAAGAGAATTTCAAGAACAATCTGTGTCCTGTTTTGATTCTCTATTGGCCTATTCGATTTTTTTGTCAAGGAACATAG 2541 0.4349 MKLCFFLCLLCSFAFLALGSNVSYDGRSLIIDGQRKLLLSASIHYPRSVPAMWPSLVQTAKEGGIDVIETYVFWNGHELSPGNYYFGGRFDLVKFVKIVQQAGMHLILRIGPFVAAEWNYGGVPVWLHYIPGTVFRTYNQPFMSHMQNFTTYIVNLMKQEKLFASQGGPIILSQAKNEYGYYENFYKEDGKKYAMWAAKMAVAQNTGVPWIMCQQWDAPDPVIDTCNSFYCDQFKPTSPNRPKIWTENWPGWFKTFGGRNPHRPAEDVAYAVARFFQKGGSVQNYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYQINRLPRFPKWGHLKELHRAIKLCEPVLLNGKSVNITLGPSVEADVYTDESGACAAFIANIDDKNDRTVEFRNMSYHLPAWSVSILPDCKNVVFNTAKVSTQTHVVSMIDENLQQSDKGAVTFKWDVLKENAGIWGEADFVKTGFVDLINTTKDTTDYLWHTTSIYVGENEEFLKNGSKPVLLINSTGHALHAFVNQEYQGTGTGNGTHSPFFFKNPIPLRPGKNEIALLCLTVGLPTAGPFYDFVGAGLISVKIKGFNNGTVDLSSSAWSYKIGVQGEQLKLYQGDGSSSLKWTTTSKPPKGQALTWYKAVVDAPSGDEPIGLDMLHMGKGLAWLNGEEIGRYWARNSEFEEKDCVQECDYRGKFLPDKCDTDCGKPTQKWYHVPRSWFKPSGNTLVIFEEKGGDPTKIKFLRRKVTGACADVAEDYPSIGLDSQGEDKINKNTPFARLTCPGNTIISSVKFASFGTPTGKCGSYLLGSCHDPNSSTVVEKACLNKNDCVVKLAEENFKNNLCPVLILYWPIRFFCQGT 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03184 846 SUPERFAMILY Galactose-binding domain-like 399 560 IPR008979 -
Aip08g03184 846 SUPERFAMILY Galactose-binding domain-like 585 752 IPR008979 -
Aip08g03184 846 Gene3D - 751 846 IPR043159 -
Aip08g03184 846 Gene3D Glycosidases 16 284 - -
Aip08g03184 846 PANTHER BETA-GALACTOSIDASE 10 16 837 - -
Aip08g03184 846 Gene3D - 592 737 - -
Aip08g03184 846 Gene3D - 286 437 - -
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 32 49 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 281 296 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 301 317 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 244 259 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 53 71 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 108 127 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 165 180 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Aip08g03184 846 Pfam Galactose binding lectin domain 766 843 IPR000922 GO:0030246
Aip08g03184 846 Pfam Glycosyl hydrolases family 35 28 336 IPR031330 -
Aip08g03184 846 SUPERFAMILY (Trans)glycosidases 19 341 IPR017853 -
Aip08g03184 846 Pfam Beta-sandwich domain in beta galactosidase 344 415 IPR041392 -
Aip08g03184 846 ProSiteProfiles SUEL-type lectin domain profile. 758 844 IPR000922 GO:0030246
Aip08g03184 846 PANTHER BETA-GALACTOSIDASE RELATED 16 837 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03184 Aip-Chr8 122546400 122554925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g03184 4 734 Glycoside Hydrolase AT5G63810 69.158 0.0 1087
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03184 - - gmx:100815037 1510.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03184 08 122546400 122554925 Aip08g03184 08 122546400 122554925 ECH
Aip03g00077 03 704527 721303 Aip08g03184 08 122546400 122554925 ECH
Aip05g00384 05 4336180 4340873 Aip08g03184 08 122546400 122554925 ECH