Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00077 ATGGAAGATAGTATTAATCAAGAAGTAACTACTGATAACAATGCTTCTGTGAATAATAACATGTCTGCCGATACTCCTATTCCGAATGATGCTGCTAATCCTAATTCCCGTAGTGCTAACGATAGTCAGTCACAAAGTTCTTCTAACCTTAGGGAAAAAACAGATTTAGCTTGGAAATATGTTGCTCTACAAATGATGGAAAGTTTGTTGAAAGATATTCAGACCAACAAAAAGAAAAGAAAAATAAGTTTTGGTGAAGAGGGTGGTGATGAGGTAGATGATGCAATTGATGAGGCAATAGCTCAAGAAGAACAGGAACAGCAGCGTACCTCAAGTCAGCAAGGAGTTGGAGGCGATCCAAAGAAAAAAGCCAAAGTCATTCCTCCTATGAAGGAAAAAGAAAAAAGAAAGCAAAAGACACAATATGATCCAATTGATTATGAAAGCATCAGTCAAGTTGACTTTTGGGTGACTGAAGAGGTTGTAGAGAAAGAGCCTGATCTTCCTAGTAATGTGGATGACTTATTGCGTGAAATTGATGCTGATTTATATCAAAGTGGCGGTGGTAGTAGTGGTCTTTATGCTGCATCTCTTGATTCTTCTGCTGAACAGGGTGGGAATGAAGGTGAAAATCATCCCACCGAAGCAGATTTCGGCTTTGCCACGCACGCAAACTGGGAAGGATGCCGTGGACGATACCTTAGTGGCCTTCGCACAATGAAGAACAAGAAGATGCAGACGTCGAATTCTACAATCGTAATTGTGCTGTTTGCGTGTTTCTGCTTCGTAACGGTCACGGAGGCAGAAGAATACTTCAAGCCCTTCAATGTCAGCTACGATCACAGGGCTCTCATTATCGACGGCCACCGTCGCATCCTCATCTCTGCCGGAATTCACTACCCTCGCGCCACTCCCGAGATGTGGCCTGATCTGATTGCAAAGAGCAAGGAAGGCGGGGCAGACGTAATTGAAACTTATGTTTTCTGGAATGGGCATGAACCAGCGAGAGGACAGTATAATTTTGAAGGGAGATATGATCTTGTGAAGTTTGCAAAACTTGTTGCATCCAAGGGACTCTATTTCTTTTTGCGTATAGGACCTTATGCTTGTGCTGAGTGGAACTTTGGGGGTTTTCCTGTGTGGTTGCGTGATATCCCTGGTATTGTATTTAGAACAGACAATGAACCTTTCAAGGTGGAGATGGAGCGGTTTGTTTCTAAGGTGGTGAACATAATGAGAGACGAAAAGCTGTTTTCTTGGCAAGGAGGTCCTATAATTTTGTTGCAGATTGAGAATGAATATGGGAACATTGAAGGCTCCTTTGGCAAGGCAGGTAAAGAGTATACTAAATGGGCAGCTGGAATGGCTCTAAGTCTTGGTGCTGGTGTTCCTTGGGTCATGTGCAAGCAAACTGATGCTCCATATGATATTATTGATACATGCAACGCATACTATTGTGATGGGTTCAAACCTAACTCTCCTCACAAACCAATTATGTGGACAGAGAACTGGGATGGATGGTATACTCAATGGGGTGAAAGATTGCCCCATAGACCTGTTGAAGACCTTGCATTTGCTGTTGCACGGTTTTTCCAGCGTGGAGGAAGCTTTCAGAACTACTATATGTTTTTTGGTGGAACAAATTTTGGTCGCACTGCAGGGGGACCCCTGCAAATTACAAGTTACGATTATGATGCTCCAATTGATGAGTATGGTCTGCTTAGTGAGCCAAAATGGGGTCACTTGAAAGATTTACATGCTGCTTTAAAGCTTTGTGAGCCTGCTTTGGTGGCAGCTGATTCACCAACATACATAAAATTGGGCCCAAAGCAAGAGGCACATGTGTACCAATTAGATGTTCGCCCTAAATTAGTGAACTTGTCTCTTTCTGGATTTTCTAGTATATGCTCAGCATTTCTTGCCAACATTGACGAAAAGAAAACAGCTACTGTGACCTTCCAAGGTCGAACATATACTCTACCACCATGGTCTGTGAGTATTTTACCAGATTGCAGGAATACAGTTTACAATACTGCCAAGATTGGAGCACAAACTTCAGTCAAATTGTTAGACTTTGATTTGCCACTTGTCTCAAGTCTTTTCCCATCCCAGAAATTGATCAATCAAGATGGCATTTTCCGCAGCTCAAGTTCTTGGGTGACTGCAAAAGAGCCAATTCGTGTTTGGAGTAACAGCAGTTTCACTGTACAAGGTATATTGGAGCATTTAAATGTAACAAAGGATCAATCTGATTATCTTTGGTATTCAACCAGAATATATGTTTCAGATAGCGACATCTTGTTTTGGAAGGAAAATGATGTTACTCCAAAACTTACTATAGATGGCATCCGTGACATACTGCGTGTATTTATCAATGGCCAGCTTATAGGTAACACTGTTGGTCATTGGATCAAGGTGGTCCAGACAGTTCAATTTGCTCCAGGATACAATGATTTAACACTGTTATCTCAGACAGTGGGCTTACAGAATTACGGTGCCTTCCTTGAGAAAGATGGTGGAGGGATTAGAGGTACAATCAAGCTCACGGGATTCGAAAATGGAGATATAGATCTTTCAAAATCATTTTGGACCTACCAGGTTGGACTTCAGGGTGAGTTTCTAGAATTTTACAGTGAAGAGAATGATAATGCAGAATGGGTTGAATTAAGTCCTGAGGCCCTTCCATCCATATTTACATGGTACAAGACATATTTTGATGTCCCTGATGGCACAAATCCAATTGCTCTTGACCTGCAAAGCATGGGGAAAGGTCAGGTTTGGGTGAATGGCAATCATATTGGACGATACTGGACATGGGTCTCCCCTAAAGATGGATGTGAACAATTTTGTGATTATCGTGGAGCATACAGTTCGGACAAGTGTACAACTAATTGTGGAAAACCTACTCAAACCTTGTACCATGTGCCACGGTCATGGCTGAGAGCATCAAACAATTTACTTGTCATTTTGGAGGAAACAGGTGGAAATCCATTTGCGATTTCTGTTAAGTTGCATTCGGCCAGGACAATATGTGCTCAAGTGTCAGAATCGCACTATCCACCGTTGCAGAAATTGGTGAATGTAGATGTCATTGGTCAAGAAGTTTCCGTAGATAATATGATTCCTGAAATGCATTTATGGTGCCAAGATGGACAGATAATTTCCTCCATAACTTTTGCTGGTTTTGGAACACCTGAAGGTAGTTGTCAGAATTTTTCTCAAGGGCAATGCCATGCACCTAGTTCAATGTCCACGGTATCCAAGGCTTGCCAAGGGAAAAGTAGCTGTTCAATCAAAATATCGAGCAGTGTGTTCGGAGGTGACCCATGTGAAGGTGTTGTCAAAACATTGGCTGTGGAGGCAAGGTGCACATCACCGTCAAGTGATGGCTTCGTAAGCAGCGTTTAG 3408 0.4222 MEDSINQEVTTDNNASVNNNMSADTPIPNDAANPNSRSANDSQSQSSSNLREKTDLAWKYVALQMMESLLKDIQTNKKKRKISFGEEGGDEVDDAIDEAIAQEEQEQQRTSSQQGVGGDPKKKAKVIPPMKEKEKRKQKTQYDPIDYESISQVDFWVTEEVVEKEPDLPSNVDDLLREIDADLYQSGGGSSGLYAASLDSSAEQGGNEGENHPTEADFGFATHANWEGCRGRYLSGLRTMKNKKMQTSNSTIVIVLFACFCFVTVTEAEEYFKPFNVSYDHRALIIDGHRRILISAGIHYPRATPEMWPDLIAKSKEGGADVIETYVFWNGHEPARGQYNFEGRYDLVKFAKLVASKGLYFFLRIGPYACAEWNFGGFPVWLRDIPGIVFRTDNEPFKVEMERFVSKVVNIMRDEKLFSWQGGPIILLQIENEYGNIEGSFGKAGKEYTKWAAGMALSLGAGVPWVMCKQTDAPYDIIDTCNAYYCDGFKPNSPHKPIMWTENWDGWYTQWGERLPHRPVEDLAFAVARFFQRGGSFQNYYMFFGGTNFGRTAGGPLQITSYDYDAPIDEYGLLSEPKWGHLKDLHAALKLCEPALVAADSPTYIKLGPKQEAHVYQLDVRPKLVNLSLSGFSSICSAFLANIDEKKTATVTFQGRTYTLPPWSVSILPDCRNTVYNTAKIGAQTSVKLLDFDLPLVSSLFPSQKLINQDGIFRSSSSWVTAKEPIRVWSNSSFTVQGILEHLNVTKDQSDYLWYSTRIYVSDSDILFWKENDVTPKLTIDGIRDILRVFINGQLIGNTVGHWIKVVQTVQFAPGYNDLTLLSQTVGLQNYGAFLEKDGGGIRGTIKLTGFENGDIDLSKSFWTYQVGLQGEFLEFYSEENDNAEWVELSPEALPSIFTWYKTYFDVPDGTNPIALDLQSMGKGQVWVNGNHIGRYWTWVSPKDGCEQFCDYRGAYSSDKCTTNCGKPTQTLYHVPRSWLRASNNLLVILEETGGNPFAISVKLHSARTICAQVSESHYPPLQKLVNVDVIGQEVSVDNMIPEMHLWCQDGQIISSITFAGFGTPEGSCQNFSQGQCHAPSSMSTVSKACQGKSSCSIKISSSVFGGDPCEGVVKTLAVEARCTSPSSDGFVSSV 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00077 1135 Gene3D Glycosidases 275 593 - -
Aip03g00077 1135 Pfam Galactose binding lectin domain 1046 1123 IPR000922 GO:0030246
Aip03g00077 1135 PANTHER BETA-GALACTOSIDASE RELATED 268 1118 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 MobiDBLite consensus disorder prediction 1 52 - -
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 499 514 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 536 551 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 420 435 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 556 572 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 287 304 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 896 910 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 923 939 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 308 326 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 PRINTS Glycosyl hydrolase family 35 signature 363 382 IPR001944 GO:0004553|GO:0005975
Aip03g00077 1135 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 422 434 IPR019801 GO:0004553|GO:0005975
Aip03g00077 1135 Gene3D - 1026 1128 IPR043159 -
Aip03g00077 1135 SUPERFAMILY Galactose-binding domain-like 665 851 IPR008979 -
Aip03g00077 1135 ProSiteProfiles SUEL-type lectin domain profile. 1042 1124 IPR000922 GO:0030246
Aip03g00077 1135 PANTHER BETA-GALACTOSIDASE 10 268 1118 - -
Aip03g00077 1135 MobiDBLite consensus disorder prediction 195 216 - -
Aip03g00077 1135 Gene3D - 730 858 - -
Aip03g00077 1135 Gene3D - 872 1010 - -
Aip03g00077 1135 MobiDBLite consensus disorder prediction 103 142 - -
Aip03g00077 1135 Pfam Beta-sandwich domain in beta galactosidase 605 681 IPR041392 -
Aip03g00077 1135 Pfam Glycosyl hydrolases family 35 284 588 IPR031330 -
Aip03g00077 1135 SUPERFAMILY (Trans)glycosidases 274 593 IPR017853 -
Aip03g00077 1135 MobiDBLite consensus disorder prediction 124 142 - -
Aip03g00077 1135 SUPERFAMILY Galactose-binding domain-like 861 1026 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00077 Aip-Chr3 704527 721303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00077 239 1089 Glycoside Hydrolase AT2G32810 67.371 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00077 - - ccaj:109799560 1553.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00077 03 704527 721303 Aip03g00077 03 704527 721303 ECH
Aip03g00077 03 704527 721303 Aip05g00384 05 4336180 4340873 ECH
Aip03g00077 03 704527 721303 Aip08g03184 08 122546400 122554925 ECH