Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00384 ATGCTTCTCTTCTCTGGTTCAATTCATTATCCTCGTTGCCCCCCTGAGATGTGGCCAAACATTTTCAAGAAAGCCAAAGAAGGAGGGCTAAATGTGATTCAGACTTATGTCTTTTGGAATATTCATGAACCAGTACAAGGCCAATTCAATTTTGAAGGAGACTATGATTTAGTGAAATATATAAAGACAATTGGGGAGAGTGGTATGTATGCAACACTTAGAGTTGGGCCATTCATAGAGGCTGAATGGAATTATGGAGGATTGCCAGTATGGTTAAAACATGTTCCCAACATTACATTCAGATCAGACAATGAACCTTTCATGTATCACATGGAAAAGTTCACCACAATAATCATAAAAAAGATGATGGATGAGAAGCTTTTTGCCTCTCAAGGAGGTCCAATTATTTTGTCACAGATTGAAAATGAATATAACACAGTTCAAAAGGCATACAAAGAACACGGAACGGCGTACGTCCATTGGGCAGGAGACATGGCAGTTGGCCTAAACACTGGAGTTCCATGGATTATGTGCAAGCAATCAGATGCACCAGGTTCAGTGATAAATACTTGCAATGGAAGAAACTGTGGAGATACTTTTGTTGGCCCCAACAGTCCTAATAAACCAATATTATGGACTGAGAATTGGACAGCACAGTATAGAGCATTTGGAGATCCTCCATCACAAAGAACTGCTGAAGACATTGCATTCTCCATTGCTAGATTCTTCTCTAAGAATGGAACTCTTGCTAACTATTATATGTATTATGGTGGAACGAATTTTGGACGAACAACGTCGTCTTTCATAACAACTCGGTACTATGATGAAGCTCCTCTTGATGAATATGGACTGCAGAGGGAACCAAAATGGGGGCATCTGCGAAACTTGCACGACGCTTTGAAACTTAGCCAGAAAGCTTTATTGTGGGGAACTCCATCACTGCAAGAGTTCAGTGATGATACAGAGGCCAGAGTTTATGAGGGGAAAGGAAACACATGCACTGCTTTCTTGTCTAACAACAACACTTTATTGGATGCAACTGTGGAATTTAGAGGAGTCAAATATTACCTGCCGCCGCGTTCTATAAGCATACTCCCCGACTGCAAAATAGTTGTCTACAACTCAAGAATGATTGTTTCCCAACACAATGAAAGAAGATACAAGGATTCAAATATTGCCAATAATCTCCAATGGACAATGTTCAAAGAGACCATTCCTACCCCAGATACTTCTCCTCTTAAATTTGTAGAGCCTTTGGAGCACTTCAGCACAACCAAGGATGATTCTGATTATCTATGGTTTACAACAAGTTTAAAGTTGGACGCTACTCAGTTAAACTCGGCAACTGGTCGCCTGGTGCTTGAAATAACATCCCTTGGTCACCTTTTGCATGCATTTGTGAATGGTGAATACATAGGATCTGGGCATGGGACCCTTATACGAAAGAATTTCGTCTTCAAAAAACCGATATCCTTGAAGCCAGGAGTAAATTACATATCAATCTTGGGTGCAACTGTTGGGTTCCCTGATAGCGGATCCTATTTGGAGCACAGGGTCGCTGGTGTGCGCGCTATAACCCTGCTTGGCCTTAAAACTAGTCCTCTTGATCTGTCGAGAAAAGGATGGTCACATAAGATCAGCTTAGATGGCGAAAAAAATAACATTTTCACAGAGCAGGGTTCTCAGAAGGTTAAGTGGACTAAAGCCGACAAGGGGGCGGCTCTTACATGGTACAAGGCTAACTTTGATGCTCCTGAGGGAAATGACCCTGTTGCTATTCAAATGGAAACCATGTCCAAAGGCATGGTTTGGGTTAATGGAAAAAGCATTGGGCGTTATTGGCCATCATACCTCTCTCCTCTAGGAAATCCTTCGCAGGGCATATATCATATCCCAAGAGCTTTCTTGAAGCCAAAGGAAAATCTAATAGTTGTATTAGAGGAAATGGGAGGGAAAGTAGAGGGTATCAAGATCCAAACCGTCAATAGAGATACAATTTGCAGCATAGTAAGGGAAGATTATCCACCAAATGTGAAGACATGGAGGAGAGATCTGGGCGTGGTAAGCACCAAAGTGAAGAATCCAAAACCAACAGCAAACTTGGCGTGTCCTGAGAACAAAATAATTACTCATGTAGAATTTGCAAGTTATGGTGATCCGGTAGGCGAGTGTGGACATTTGTTCCCTGGAAACTGCACTTCACCAAATAGCCAGAAGGTGGTTGAACAGTATTGCCTGGGAAAGGCAAAGTGTGCTGTGCCCCTGGACAAGAATATATTTGACAACCAAGGAAAATTATGTCCAAATAACTTAAAGACTCTTGCTGTTCAAGCACACTGTGGCCACCAAACCTGA 2355 0.4187 MLLFSGSIHYPRCPPEMWPNIFKKAKEGGLNVIQTYVFWNIHEPVQGQFNFEGDYDLVKYIKTIGESGMYATLRVGPFIEAEWNYGGLPVWLKHVPNITFRSDNEPFMYHMEKFTTIIIKKMMDEKLFASQGGPIILSQIENEYNTVQKAYKEHGTAYVHWAGDMAVGLNTGVPWIMCKQSDAPGSVINTCNGRNCGDTFVGPNSPNKPILWTENWTAQYRAFGDPPSQRTAEDIAFSIARFFSKNGTLANYYMYYGGTNFGRTTSSFITTRYYDEAPLDEYGLQREPKWGHLRNLHDALKLSQKALLWGTPSLQEFSDDTEARVYEGKGNTCTAFLSNNNTLLDATVEFRGVKYYLPPRSISILPDCKIVVYNSRMIVSQHNERRYKDSNIANNLQWTMFKETIPTPDTSPLKFVEPLEHFSTTKDDSDYLWFTTSLKLDATQLNSATGRLVLEITSLGHLLHAFVNGEYIGSGHGTLIRKNFVFKKPISLKPGVNYISILGATVGFPDSGSYLEHRVAGVRAITLLGLKTSPLDLSRKGWSHKISLDGEKNNIFTEQGSQKVKWTKADKGAALTWYKANFDAPEGNDPVAIQMETMSKGMVWVNGKSIGRYWPSYLSPLGNPSQGIYHIPRAFLKPKENLIVVLEEMGGKVEGIKIQTVNRDTICSIVREDYPPNVKTWRRDLGVVSTKVKNPKPTANLACPENKIITHVEFASYGDPVGECGHLFPGNCTSPNSQKVVEQYCLGKAKCAVPLDKNIFDNQGKLCPNNLKTLAVQAHCGHQT 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00384 784 SUPERFAMILY (Trans)glycosidases 2 303 IPR017853 -
Aip05g00384 784 Gene3D - 540 673 - -
Aip05g00384 784 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 132 144 IPR019801 GO:0004553|GO:0005975
Aip05g00384 784 Gene3D - 685 784 IPR043159 -
Aip05g00384 784 SUPERFAMILY Galactose-binding domain-like 542 684 IPR008979 -
Aip05g00384 784 SUPERFAMILY Galactose-binding domain-like 362 522 IPR008979 -
Aip05g00384 784 ProSiteProfiles SUEL-type lectin domain profile. 693 781 IPR000922 GO:0030246
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 18 36 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 73 92 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 130 145 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 211 226 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 267 283 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 573 587 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PRINTS Glycosyl hydrolase family 35 signature 600 616 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 PANTHER BETA-GALACTOSIDASE 14 2 778 - -
Aip05g00384 784 Pfam Glycosyl hydrolases family 35 2 299 IPR031330 -
Aip05g00384 784 Gene3D Glycosidases 1 304 - -
Aip05g00384 784 PANTHER BETA-GALACTOSIDASE RELATED 2 778 IPR001944 GO:0004553|GO:0005975
Aip05g00384 784 Pfam Beta-sandwich domain in beta galactosidase 307 376 IPR041392 -
Aip05g00384 784 Pfam Galactose binding lectin domain 701 780 IPR000922 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00384 Aip-Chr5 4336180 4340873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00384 2 781 Glycoside Hydrolase AT2G16730 55.909 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00384 - - egr:104419643 1123.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00384 05 4336180 4340873 Aip05g00384 05 4336180 4340873 ECH
Aip03g00077 03 704527 721303 Aip05g00384 05 4336180 4340873 ECH
Aip05g00384 05 4336180 4340873 Aip08g03184 08 122546400 122554925 ECH