Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00569 ATGCCATTCATATTTATTTCTACTCATTTCAAAACAAACATCATGGCATCATCTTCTATGTTGTTCTTCTTACTCTCCACCATCTTCCTCTTCATTTCACCTTCATTCTCCTCTCCAGCTCAAACTACAACTTGCCCCTCAGGCGACTCTTTCACGGCCGAGAGCCTCATCAGAGGCCTTAACCTATTCCCTAAAGGCTCCATTAACAGAATAGAGAGTAACACTCATCTTGTCCCTGGAAAGATTGTGAAGAAGAAGCTCACATTCCCTTACAATCTTGCTTCTTCTTCTTCTTCTTCAGGTACATCTGTTCAAGATCTTGGTCATCATGCAGGGTACTATCGCCTTCCTCGTTCCAAAGCGGCAAGGATGTTCTACTTTTTCTTTGAATCTCGCAATAAGAAGGAAGACCCTGTTGTCATATGGTTGACCGGAGGACCAGGGTGCAGCAGTGAGCTTGCTTTATTTTATGAGAATGGTCCTTTCCAAATCACAAAGAACTTGTCTCTTGTTTGGAATGAATTTGGCTGGGACAAGGCATCAAATATTCTTTTTGTAGACCAGCCTATTGGGACAGGCTTTAGTTATACTTCTGATGATGATGACATCCGCCATGATGAAGCAGGTGTTAGCAATGATCTCTATGATTTCTTGCAGGCATTTTTCAAGGAGCACCCTCAATTTGTCAAGAATGATTTCTACATCACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCAAGGGTTCACCAAGGCAACAAAGCAAAGGAAGGAATAATAATCAATCTCAAGGGTTTTGCTATTGGTAATGGTTTGACCAATCCGGAAATTCAGTACCAAGCATACACAGACTATGCATTAGACAGAGGACTGATTAAAAAGTCTGATTATGATAGTATCAGCAAGTTGATCCCATCATGCAAAGATGCCATAAAAAGCTGTGGTACCGATGGTGGAGATGCATGTATGACTTCATTATATAAATGCAATGCCATATTCAGTCGGATAATGTCCATCGCCGGCGACATTAATTACTATGACATTAGAAAGAAATGCGAGGGAAATCTGTGTTATGACTTCTCCAATGTAGAGACATTCTTAAACGAGAAGACAGTTAGGGATGCTTTAGGTGTTGGGGACTTGGACTTTGTTTCGTGCAGTAGCACAGTCTATGATGCTATGATGGAGGACTGGATGAGAAATCTCGAAGTTGGAATCCCAGCTCTTCTTGAGGATGGAATCCAGGTTCTTGTATATGCTGGAGAAGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCAATGGAGTGGTCAGGTCAAAAGGAGTTTGAAGTAGCTTCTACTGTCCCATTTTTGGTAGATGGCGCGGCAGCAGGGACTCTTAAAAGCCATGGACCTCTTGCGTTCCTCAAGGTGAACGAAGCTGGGCACATGGTTCCCATGGATCAACCAAAAGCTGCACTTCAGATGCTAACAAACTGGATGCAAGGGAAACTAACACCGAAAAAGGGTGGAGCCAATGTCTCTCCTAAATGA 1557 0.4271 MPFIFISTHFKTNIMASSSMLFFLLSTIFLFISPSFSSPAQTTTCPSGDSFTAESLIRGLNLFPKGSINRIESNTHLVPGKIVKKKLTFPYNLASSSSSSGTSVQDLGHHAGYYRLPRSKAARMFYFFFESRNKKEDPVVIWLTGGPGCSSELALFYENGPFQITKNLSLVWNEFGWDKASNILFVDQPIGTGFSYTSDDDDIRHDEAGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRVHQGNKAKEGIIINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKSDYDSISKLIPSCKDAIKSCGTDGGDACMTSLYKCNAIFSRIMSIAGDINYYDIRKKCEGNLCYDFSNVETFLNEKTVRDALGVGDLDFVSCSSTVYDAMMEDWMRNLEVGIPALLEDGIQVLVYAGEEDLICNWLGNSRWVHAMEWSGQKEFEVASTVPFLVDGAAAGTLKSHGPLAFLKVNEAGHMVPMDQPKAALQMLTNWMQGKLTPKKGGANVSPK 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00569 518 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 507 IPR001563 GO:0004185|GO:0006508
Aip08g00569 518 Pfam Serine carboxypeptidase 106 504 IPR001563 GO:0004185|GO:0006508
Aip08g00569 518 ProSitePatterns Serine carboxypeptidases, serine active site. 235 242 IPR018202 GO:0004185
Aip08g00569 518 SUPERFAMILY alpha/beta-Hydrolases 107 506 IPR029058 -
Aip08g00569 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 185 IPR001563 GO:0004185|GO:0006508
Aip08g00569 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 186 196 IPR001563 GO:0004185|GO:0006508
Aip08g00569 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 221 246 IPR001563 GO:0004185|GO:0006508
Aip08g00569 518 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Aip08g00569 518 PANTHER SERINE CARBOXYPEPTIDASE 3 40 507 - -
Aip08g00569 518 Gene3D alpha/beta hydrolase 87 514 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00569 Aip-Chr8 4894118 4897307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00569 K16298 - gmx:100785987 810.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00569 08 4894118 4897307 Aip08g00569 08 4894118 4897307 ECH
Aip08g00569 08 4894118 4897307 Aip03g00294 03 2856046 2860639 PCT
Aip03g00293 03 2848311 2854495 Aip08g00569 08 4894118 4897307 PCT