Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00293 ATGGCATCACCATCACCAACCCTCACCAAAATAATCTCTCACCCATTTTTCTTCTTTCTCTTCTTCTTTTCATGTTCTACTATTCTATCCTATGCAATAAGAACTTCTTCATCACCATCATCATCCATCAATAGTAATGATCTTCATCATCTCTCTCGAGCAGAGAGGCTCATAAGAAGCCTTAATCTGTTTCCAACAAAGCCAGTTAACATCATAGGAGGAGGAGGAAGTGGTGACGACGATGTGTTCGTGCCTGGAAAGATTGTTGAGAAGAACTTCTCATTTCTTTCTCTTTCTAATTCTGATCATCCTTCTATTCATGATCTTGGTCACCATGCTGGATATTATTCTCTTGTTCACACCAAAGCTGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAAGGATGACCCAGTTGTGATATGGTTGACTGGAGGACCAGGGTGTAGCAGTGAACTTGCATTGTTCTATGAAAATGGTCCGTTCACAATTACTCGTAACTACCTCTCACTTCTATGGAATGATTATGGTTGGGACAAGGCATTTTTCAAAGAGCACTCGGAGTTTGTGAATAATGATTTCTATATCACTGGAGAATCATATGCTGGACATTACATTCCAGCTTTTGCATCTCGAGTTCATCAAGGAAACAAAAATCAGGAAGGAATTCATATAAATTTAAAGGGTATTGCTATTGGTAATGGATTAACTAATCCTGGAATCCAATACAGAGCATACACTGATTATGCATTACACAATAAATTAATTACAAAAGATGATCATCAAACTATCAATAAGTTGGTCCCACCGTGTGAACAAGCCATTCAAACTTGCGCCAAGGAAGGTGAAAAAGCCTGTGTAACAGCCAAGGGTAAATGTGAAAGTATATTTGATAGCATCTTATCAATTACCGGAAATATTAACTACTATGACATCCGAAAAAAATGCTACGGGGAAATGTGCTATGATTTTTCGGACATGGAGAGATTTTTGAGAGAAGGAAAAGTGAGGGAAGCTTTAGGTGTTGGGAAGTTGGAGTTTGTTTCATGTAGTAGGAGAGTGTATGATGCTATGAATGGGGATTGGATGAAGAATTTGGAAGTTGATATTCCAAATCTTCTTGAAGATGGTATTAGATTGCTTGTGTATGCTGGTGAAAAAGATCTCATTTGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGAAATGGTCAGGTCAAGAACAATTTAGAGCATCTCCTACAATCCAATTTGTGGTCAACGGTTCACATGCCGGTTCACTAAAAAGCTATGGCCCACTTGCTTTCCTTAAGGTAAATGAAGCAGGGCACATGGTGCCAATGGATCAACCAGAAGCTGCACTTGAAATGATCACAAGATGGATGAAAGGGATATTAACTGTCACAACCCAAACTCACTATGCCTCACATAATTAA 1446 0.388 MASPSPTLTKIISHPFFFFLFFFSCSTILSYAIRTSSSPSSSINSNDLHHLSRAERLIRSLNLFPTKPVNIIGGGGSGDDDVFVPGKIVEKNFSFLSLSNSDHPSIHDLGHHAGYYSLVHTKAARMFYFFFESRNNKDDPVVIWLTGGPGCSSELALFYENGPFTITRNYLSLLWNDYGWDKAFFKEHSEFVNNDFYITGESYAGHYIPAFASRVHQGNKNQEGIHINLKGIAIGNGLTNPGIQYRAYTDYALHNKLITKDDHQTINKLVPPCEQAIQTCAKEGEKACVTAKGKCESIFDSILSITGNINYYDIRKKCYGEMCYDFSDMERFLREGKVREALGVGKLEFVSCSRRVYDAMNGDWMKNLEVDIPNLLEDGIRLLVYAGEKDLICNWLGNSRWVHAMKWSGQEQFRASPTIQFVVNGSHAGSLKSYGPLAFLKVNEAGHMVPMDQPEAALEMITRWMKGILTVTTQTHYASHN 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00293 481 ProSitePatterns Serine carboxypeptidases, serine active site. 198 205 IPR018202 GO:0004185
Aip03g00293 481 Gene3D alpha/beta hydrolase 183 476 IPR029058 -
Aip03g00293 481 Gene3D alpha/beta hydrolase 101 182 IPR029058 -
Aip03g00293 481 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 183 469 - -
Aip03g00293 481 Pfam Serine carboxypeptidase 183 467 IPR001563 GO:0004185|GO:0006508
Aip03g00293 481 Pfam Serine carboxypeptidase 108 182 IPR001563 GO:0004185|GO:0006508
Aip03g00293 481 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 46 183 - -
Aip03g00293 481 SUPERFAMILY alpha/beta-Hydrolases 109 468 IPR029058 -
Aip03g00293 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 183 469 IPR001563 GO:0004185|GO:0006508
Aip03g00293 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 46 183 IPR001563 GO:0004185|GO:0006508
Aip03g00293 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Aip03g00293 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 437 450 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00293 Aip-Chr3 2848311 2854495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00293 K16298 - gmx:100785987 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00293 03 2848311 2854495 Aip03g00293 03 2848311 2854495 ECH
Aip03g00293 03 2848311 2854495 Aip08g00569 08 4894118 4897307 PCT