Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00294 ATGGCATCAAAAAGGTCTCTCATCACTCTTTGTTTGTTCTTGTTCTACTTATCATTAACATTTTGTTTGTGTTATGGAACAAGAACATTGTCCCCATTATCATCATCCACAAATGATGTTCTTCTTAGGATGCCCCCAGCAGAAAGGCTGATAAGAAGCTTCAATCTGTTTCCAAGAAAATCAGTAAACATAAGAAGAGGAAGTAGTGATGATGTGTTTGTCCCTGGAAAATTAGTGGAGAAGAAGTTCTCATTTCTTGCTGATTCTTCTGTTCAAGAATTAGGTCATCATGCCGGCTATTATTCTCTCCCTCGTACCAAAGCCGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAATAGCAAAGATGCCCCAGTTGTGATATGGTTGACTGGAGGACCAGGATGTGGCAGTGAACTTGCATTGTTCTATGAGAATGGTCCTTTCAAAATTACTAGTAACATGTCTCTTCTATGGAATGACTATGGTTGGGACAAGGTTTCAAACCTTATATATGTTGATCAACCAACTGGGACAGGATTCAGCTACAGTTCTGATGAGTCAGACCTTCGGCATGATGAAACGGGTGTTAGCAACGATCTTTACGATTTTTTACAGGCATTTTTCAAAGAGCATCCTCAGTTTGTTAAGAATGATTTTTATATTACCGGAGAATCATATGCTGGACACTATATTCCAGCTCTTGCATCTCGAATTCATCAAGCTAACAAACAAAAACAAGCAATTCTTATAAATCTAAAGGGTTTTGCAATTGGCAATGGATTAACCAATCCTGGGATTCAATATGCAGCATATACGGATTTTGCATTATCCAATAAATTAATTACAAAGAGTGATTACAACAACATCAACTCCAAGCTCCAAGGATGTGAACAAGAAATAAAAAACTGCGCAACTGAAGGTGGAGACCAGTGTGCCGCCGCTAAAGCCACATGCGACCAAATATTCCAAAGTATCCTTAGCGCTGCTGGCAACGTTAATTACTATGACATTAGAAAAAAATGTGAAGGAGCTTTGTGCTATGACTTCTCAAACGTGGATACACTCTTAAACGAGAAGTCAGTGAAGAAGGCTTTAGGAGTGGATGATGATTTGGACTATGTTTCATGCAGTGATGAAGTGTATTTTGCTATGGTTAATGACTTCATGGTCAATTTGGAAGTGCCTATTCCACCTCTTCTTGAAGATGGGATTAGGTTTCTTGCCTATGCTGGTGAAGAAGATCTCATTTGCAATTGGCTAGCAGGTAATATAAGATGGATTAGTGCCATGAAATGGTCAGGTCAAAAAGAGTTTAACGCAACTCCTACAGTCCAATATAAAGTCAATGGTGTAGAGGCAGGTTCTCTATCAAGCCATGGACCTCTCACTTTCTTAAAGATATATAAAGCTGGACACTTGGTTCCTATGGATCAACCAGAAGCCGCACTTGATATGCTCACAAGATGGATGCAAGCCAAATTAAATTAA 1497 0.3888 MASKRSLITLCLFLFYLSLTFCLCYGTRTLSPLSSSTNDVLLRMPPAERLIRSFNLFPRKSVNIRRGSSDDVFVPGKLVEKKFSFLADSSVQELGHHAGYYSLPRTKAARMFYFFFESRNNNSKDAPVVIWLTGGPGCGSELALFYENGPFKITSNMSLLWNDYGWDKVSNLIYVDQPTGTGFSYSSDESDLRHDETGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPALASRIHQANKQKQAILINLKGFAIGNGLTNPGIQYAAYTDFALSNKLITKSDYNNINSKLQGCEQEIKNCATEGGDQCAAAKATCDQIFQSILSAAGNVNYYDIRKKCEGALCYDFSNVDTLLNEKSVKKALGVDDDLDYVSCSDEVYFAMVNDFMVNLEVPIPPLLEDGIRFLAYAGEEDLICNWLAGNIRWISAMKWSGQKEFNATPTVQYKVNGVEAGSLSSHGPLTFLKIYKAGHLVPMDQPEAALDMLTRWMQAKLN 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00294 498 Gene3D alpha/beta hydrolase 78 498 IPR029058 -
Aip03g00294 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 495 IPR001563 GO:0004185|GO:0006508
Aip03g00294 498 Coils Coil 289 309 - -
Aip03g00294 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Aip03g00294 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Aip03g00294 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Aip03g00294 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Aip03g00294 498 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
Aip03g00294 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 39 495 - -
Aip03g00294 498 Pfam Serine carboxypeptidase 94 494 IPR001563 GO:0004185|GO:0006508
Aip03g00294 498 SUPERFAMILY alpha/beta-Hydrolases 95 494 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00294 Aip-Chr3 2856046 2860639 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00294 K16298 - gmx:100797295 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00294 03 2856046 2860639 Aip03g00294 03 2856046 2860639 ECH
Aip08g00569 08 4894118 4897307 Aip03g00294 03 2856046 2860639 PCT