Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00431 ATGGCAAACAATTCTTCTAATGGAGATCACCAAACATCAACAAAGCAGCCACCTCTGCCATCTCCCTTGCGTTTCTCCAAATTCTTTCAGTCCAACATGAGAATATTGGTCACTGGAGGAGCTGGATTCATCGGGTCTCACCTGGTTGACAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCCAAGGACAATCTCAAAAAATGGATTGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTTACGGAGCCATTGTTGATTGAGGTTGATCAGATCTATCATCTTGCATGCCCAGCATCTCCTATTTTCTACAAATACAATCCTGTGAAGACAATAAAGACAAATGTGATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTACTTACATCAACTTCTGAGGTTTATGGTGATCCTCTTGTGCACCCCCAACCTGAAAGCTACTGGGGAAATGTTAACCCTATTGGAGTTCGTAGCTGCTACGATGAGGGGAAGCGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGGCTAGAAATACGCATTGCAAGAATCTTTAACACGTATGGACCGCGCATGAACATTGATGATGGACGTGTTGTTAGCAACTTCATTGCTCAGGCACTTCGTGGTGAACCCTTGACAGTCCAATCTCCAGGGACACAAACTCGCAGTTTCTGCTACGTCTCAGACATGGTTGATGGCCTTATCCGTCTCATGGAAGGACCGAACACCGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGGTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAAAGTGGAGATCAAGATGGTGGAGAACACCCCGGATGATCCACGACAGAGGAAACCGGACATAACACAGGCAAAGGAATTGTTGGGATGGGAACCGAAAATCAAGTTGCGCGATGGCCTTCCTCGCATGGAGGAGGATTTCCGTCTGAGGCTTGGAGTCGACAAGAGCAATTAA 1041 0.4515 MANNSSNGDHQTSTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCYVSDMVDGLIRLMEGPNTGPINLGNPGEFTMVELAETVKELINPKVEIKMVENTPDDPRQRKPDITQAKELLGWEPKIKLRDGLPRMEEDFRLRLGVDKSN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00431 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 28 337 IPR036291 -
Aip08g00431 346 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 346 - -
Aip08g00431 346 Pfam GDP-mannose 4,6 dehydratase 36 332 IPR016040 -
Aip08g00431 346 MobiDBLite consensus disorder prediction 1 21 - -
Aip08g00431 346 CDD UGD_SDR_e 33 337 - -
Aip08g00431 346 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 346 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aip08g00431 346 Gene3D - 32 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00431 Aip-Chr8 3297029 3300836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g00431 30 332 Miscellaneous Gene Families AT1G02000 24.179 1.55e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00431 K08678 - gmx:100790835 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00431 08 3297029 3300836 Aip08g00431 08 3297029 3300836 ECH
Aip08g00431 08 3297029 3300836 Aip03g00457 03 4473237 4476695 ECH
Aip08g00431 08 3297029 3300836 Aip03g00456 03 4468014 4471282 PCT
Aip03g00457 03 4473237 4476695 Aip08g00431 08 3297029 3300836 PCT