Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00457 ATGGCAGCCAATGCTTCTAATGGAGCAGCAAAGCAACCTCCTCAGCCATCTCCCTTGCGCTTCTCCAAGTTCTTTCAGTCCAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTTGACAGATTGATGGAAAATGAGAAGAATGAGGTCATAGTCGTTGATAACTTCTTCACTGGATCTAAAGACAACCTTAGAAAGTGGATTGGTCATCCTAGATTTGAGTTAATTCGTCACGATGTCACGGAGCAATTACTGGTGGAGGTTGATCAAATTTACCACCTTGCTTGCCCTGCTTCTCCGATTTTCTACAAATACAATCCTGTAAAGACCATAAAGACAAATGTGATTGGAACACTGAACATGCTCGGACTTGCTAAGCGAGTGGGAGCAAGGATTTTACTTACATCTACTTCAGAGGTATATGGAGATCCCCTTGTGCATCCACAACCAGAAACCTATTGGGGAAATGTTAACCCTATTGGAGTTCGAAGTTGTTATGATGAGGGCAAGCGAGTTGCAGAAACTTTGATGTTTGATTATCATAGGCAACATGGAATTGAAATCCGAATTGCAAGAATCTTTAATACATATGGACCTCGAATGAACATTGATGACGGCCGTGTTGTCAGCAATTTCATTGCTCAAGCACTCCGTGGTGAACCCCTAACGGTCCAACTTCCAGGAACTCAAACTCGCAGCTTCTGCTATGTCTCTGACATGGTTGATGGCCTTATCCGTCTAATGGAAGGCGAAAACACAGGTCCAATCAACATTGGGAACCCAGGCGAGTTTACTATGACTGAACTTGCTGAGACTGTGAAAGAGCTTATTAATCCAGATGTGGAAATCAAGATGGTTGAGAACACACCAGATGATCCAAGACAGAGAAAACCAGACATAACAAAAGCAAAGGAATTGCTTGGTTGGGAACCAAAGGTCAAGTTGAGGGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTTTGAGGCTTGGTGTTCCCAAAAAGAACTAA 1029 0.4315 MAANASNGAAKQPPQPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNFFTGSKDNLRKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAETVKELINPDVEIKMVENTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVPKKN 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00457 342 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 342 - -
Aip03g00457 342 CDD UGD_SDR_e 29 333 - -
Aip03g00457 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 24 333 IPR036291 -
Aip03g00457 342 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 342 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aip03g00457 342 Gene3D - 28 335 - -
Aip03g00457 342 Pfam GDP-mannose 4,6 dehydratase 32 326 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00457 Aip-Chr3 4473237 4476695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00457 26 341 Miscellaneous Gene Families AT1G02000 24.217 5.18e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00457 K08678 - gmx:100819843 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00457 03 4473237 4476695 Aip03g00457 03 4473237 4476695 ECH
Aip08g00431 08 3297029 3300836 Aip03g00457 03 4473237 4476695 ECH
Aip03g00457 03 4473237 4476695 Aip08g00431 08 3297029 3300836 PCT