Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00456 ATGGCATCGAAATCTCCTAAGGATGATAACCAAGATGGAAAGCAACCTCCCTTGCCATCTCCATTGCGTTTTTCCAAGTTCTTCCAGCCCAACATGAGAATTTTGATCACGGGAGGAGCTGGATTCATTGGCTCACACCTCGTCGATAGACTCATGGAAAACGAAAAGAATGAGGTCATTGTTGCTGATAACTACTTCACTGGATCCAAGGATAACATCAAACATTGGATCGGTCATCCAAGATTTGAGCTTATCCGTCATGATGTCACTGAAACTTTGCTGGTTGAGGTTGATCGGATTTACCATCTTGCTTGCCCTGCTTCTCCTATTTACTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTAGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTGTATGGAGATCCTCTTGTGCATCCCCAACCTGAGACCTACTGGGGCAATGTCAACCCTAATGGTGTGCGAAGTTGCTATGATGAGGGGAAGCGTGTGGCTGAGACTCTGATGTTTGATTATCATAGGCAACATGGCATAGAAATACGCGTTGCAAGAATCTTCAACACATATGGACCACGCATGAATATTGATGATGGCCGTGTTGTTAGCAACTTCATTGCTCAAGCAATTCGTGGTGAGTCCTTGACAGTCCAATCCCCGGGATCACAAACCCGAAGCTTCTGCTATGTCTCTGATTTGGTTGATGGCCTGATCCGTCTCATGGAAGGATCAGACACTGGCCCAATCAACCTTGGAAACCCAGGTGAATTTACAGTGCTTGAACTTGCACAGACAGTGAAGGAGCTTATTAATCCAGCTGTGGAGATAAAGACAGTGGATAACACTCCTGATGATCCAAAACAGAGAAAACCAGACATTACAAAAGCAAAGGAAGTGCTTGGTTGGGAACCAAAGTTCGCATTGAAAGATGGTCTTCCTCTTATGGAAGATGATTTCCGAAAGAGGCTTGGTGTTGCCAAAGCCAAGTGA 1038 0.4461 MASKSPKDDNQDGKQPPLPSPLRFSKFFQPNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNIKHWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIYYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPETYWGNVNPNGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQAIRGESLTVQSPGSQTRSFCYVSDLVDGLIRLMEGSDTGPINLGNPGEFTVLELAQTVKELINPAVEIKTVDNTPDDPKQRKPDITKAKEVLGWEPKFALKDGLPLMEDDFRKRLGVAKAK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00456 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 2 344 IPR044516 GO:0042732|GO:0048040|GO:0070403
Aip03g00456 345 CDD UGD_SDR_e 32 336 - -
Aip03g00456 345 Gene3D - 31 342 - -
Aip03g00456 345 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g00456 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Aip03g00456 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 2 344 - -
Aip03g00456 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 339 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00456 Aip-Chr3 4468014 4471282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00456 34 328 Miscellaneous Gene Families AT1G02000 23.636 5.09e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00456 K08678 - qsu:112026144 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00431 08 3297029 3300836 Aip03g00456 03 4468014 4471282 PCT