Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g02747 ATGGGTAGCTTTAGCGAATTCGAAGAATGTCGGTTTTTTGATGCTCAAGAAGATGTTGTGTCCATTGCAGATTCAGTATCTGATGGAACTGACACCCTTGACATCAAATCTACTTCCAATGGAAGAATAGGATTGGAGGGCTTTGACTATGATGTGTGGATTCGGAGCCCAAGGAGTGTTCGAGAGCGTAGGGGCAAGTTTATGAAGAAGATGGGACTGAGTGTGAATGGGATTGAGAATTCAGTGGATGTGGTCGGTGTTGTTGAGCAGGAAGAGGTGAGGGATAGAGTGGAGTATAGTAGTGGGGCTGTGACTAGAACTTGTGATGGTTTTGAAGAGGAGTTCTGTTCGAGTCGGTCATCTATGTCTTGTTTTTCCGGTATTGATTCTTCAAAGGAGTTTGGTTTGGAGGAGAACTTGCTGTGCCAAGACAAGAATTCAGACAAGAGAGTTGAGTGTAATGTGGATCCAAAGGGGGAACAGAGGAATATGAGGGATGGTAGGGATGTGGTTCTGGATCGGTTGGCGAATACAGGGGAACCTGATGATTCTGAGAAACCCTCTGGGGTAACTCCTTCTTGGCAGACGAATGGGAATAAAAGGAGTTGGCTCAGAAGATTGCGGTCATTTACATGTATGCTTGATAATCAAGGTGATAATGGTTTTGGCTCAGGATGTAGGCTTCAGAGAGTTAAGGTTCGACAATGCAAGAAGCAAATGAAGGAATTATCTGCTCTTTACATGAGACAAGATATCAAAGCGCATGAAGGTTCTATTACGACAATGAAATTCAGTCCTGATGGCCAGTATCTTGCAAGTGGCAGTGAAGATGGAGTTGTGCGCTTGTGGCAAGTGATTGAGGAGGATATGTCTAATGAAATTGACATTTCAGAAATTGACCCATCCTCCCTTTACTTTACAGTGAATAATCTCTCTGAATTGAAACCTCTGTTTATGGACAAGGAGAAAATCAACAAACTGAAGAGCATGAGAAAAACACAAGATTCAGCATGTATCATTTTCCCTCCTAAGATCTTCAGGTTGTTGGAGAAACCATTGCACGAGTTCTATGGGCATAGAGGTGAAGTATTGGATCTCTCCTGGTCAAAGAATAATTATCTTCTCTCATCATCCGTTGACAAAACTGTCCGTCTGTGGCAAGTGAAATCCAATAATTGCTTGAAAGTTTTCCCACACAGTAATTATGTGACATGCGTACAATTCAATCCCGTAGATGATAATTATTTCATTAGTGGATCTATAGATGGAAAAGTGCGCATCTGGACGATTCCTGATTGTCGTGTCATAGATTGGACTGACATTAGAGATATAGTAACGGCAGTATGTTATCGACCCGATGGCCAGGGAGGGATTATTGGGTCCATGGCAGGAAATTGTCGATTTTATAATGTATCAGATAATCAGTTGCAGTTGGATTCCCAACTATGTTTACTTGCTAAAAAGAAATTTACTGGAAGAGGGATAACAGGCTTTCAGTTTTTTCCACAAGATTGTAACAAAGTTATGGTTACCTGTGCGGATTCACAAGTCAGAATCCTTGACGGGCTTAATGTGATTGGCAAATACAAGAGCGTAGGCACAGGGAGCCCAATGAGTGCATCTTTCACTTCTGATGGCAAACATATATTATCAGCATCCGAGGATTCTAATGTATATATGTGGAATGTTAGTCAGGAAGAGTCTATTCCCATGAAAGCTAAGAAGATTTGGTCTTCTGAGCGGTTTTTCTCAAACGCTTCCATTGCAGTGCCTTGGCAAGGTTTGAAACCTCAGACCGTGGAAAATGAACACCAATGGAATGTCCTAGATAAAACTTCACCTGAATCTGGACATCTTAACCCACCTGCTTCATTCTCCCTGGGTCAAGAGTATTTCTTGGAGGCTTTGCCTAAGGGATCCGCAACTTGGCCGGAGGAGAAGCTTCCAATTTCTAGCTCGAAGGCAAAAACGTCTACAATGCTTAAATCCGAGTACAGGTTCCTGAAATCTTCATGCAGGAGTACCTCTCGTTCTCATGCATGGGGGATGGTCATTGTGACTGCAGGCTGGGATGGTCGGATAAAGACATTCCACAATTACGGATTACCCGTACCCGTTTGA 2121 0.4276 MGSFSEFEECRFFDAQEDVVSIADSVSDGTDTLDIKSTSNGRIGLEGFDYDVWIRSPRSVRERRGKFMKKMGLSVNGIENSVDVVGVVEQEEVRDRVEYSSGAVTRTCDGFEEEFCSSRSSMSCFSGIDSSKEFGLEENLLCQDKNSDKRVECNVDPKGEQRNMRDGRDVVLDRLANTGEPDDSEKPSGVTPSWQTNGNKRSWLRRLRSFTCMLDNQGDNGFGSGCRLQRVKVRQCKKQMKELSALYMRQDIKAHEGSITTMKFSPDGQYLASGSEDGVVRLWQVIEEDMSNEIDISEIDPSSLYFTVNNLSELKPLFMDKEKINKLKSMRKTQDSACIIFPPKIFRLLEKPLHEFYGHRGEVLDLSWSKNNYLLSSSVDKTVRLWQVKSNNCLKVFPHSNYVTCVQFNPVDDNYFISGSIDGKVRIWTIPDCRVIDWTDIRDIVTAVCYRPDGQGGIIGSMAGNCRFYNVSDNQLQLDSQLCLLAKKKFTGRGITGFQFFPQDCNKVMVTCADSQVRILDGLNVIGKYKSVGTGSPMSASFTSDGKHILSASEDSNVYMWNVSQEESIPMKAKKIWSSERFFSNASIAVPWQGLKPQTVENEHQWNVLDKTSPESGHLNPPASFSLGQEYFLEALPKGSATWPEEKLPISSSKAKTSTMLKSEYRFLKSSCRSTSRSHAWGMVIVTAGWDGRIKTFHNYGLPVPV 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g02747 706 Pfam WD domain, G-beta repeat 351 386 IPR001680 GO:0005515
Aip07g02747 706 Pfam WD domain, G-beta repeat 252 283 IPR001680 GO:0005515
Aip07g02747 706 Pfam WD domain, G-beta repeat 392 428 IPR001680 GO:0005515
Aip07g02747 706 ProSitePatterns Trp-Asp (WD) repeats signature. 549 563 IPR019775 -
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 539 571 IPR001680 GO:0005515
Aip07g02747 706 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 6 706 - -
Aip07g02747 706 SMART WD40_4 349 387 IPR001680 GO:0005515
Aip07g02747 706 SMART WD40_4 658 698 IPR001680 GO:0005515
Aip07g02747 706 SMART WD40_4 390 429 IPR001680 GO:0005515
Aip07g02747 706 SMART WD40_4 245 284 IPR001680 GO:0005515
Aip07g02747 706 SMART WD40_4 481 521 IPR001680 GO:0005515
Aip07g02747 706 SMART WD40_4 522 562 IPR001680 GO:0005515
Aip07g02747 706 SMART WD40_4 431 470 IPR001680 GO:0005515
Aip07g02747 706 Gene3D - 233 580 IPR015943 GO:0005515
Aip07g02747 706 PRINTS G protein beta WD-40 repeat signature 271 285 IPR020472 -
Aip07g02747 706 PRINTS G protein beta WD-40 repeat signature 374 388 IPR020472 -
Aip07g02747 706 PRINTS G protein beta WD-40 repeat signature 416 430 IPR020472 -
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 356 390 - -
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 396 430 IPR001680 GO:0005515
Aip07g02747 706 MobiDBLite consensus disorder prediction 177 197 - -
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 396 430 - -
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 252 293 IPR001680 GO:0005515
Aip07g02747 706 SUPERFAMILY WD40 repeat-like 247 696 IPR036322 GO:0005515
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 252 285 - -
Aip07g02747 706 PANTHER WD REPEAT DOMAIN 44 6 706 IPR040324 -
Aip07g02747 706 ProSiteProfiles Trp-Asp (WD) repeats profile. 356 396 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g02747 Aip-Chr7 112527450 112532140 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g02747 - - gmx:100817209 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g02747 07 112527450 112532140 Aip06g03140 06 126969245 126974264 ECH
Aip03g02983 03 86529395 86533157 Aip07g02747 07 112527450 112532140 ECH
Aip07g02747 07 112527450 112532140 Aip07g02747 07 112527450 112532140 ECH