Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip07g01486 ATGGCAGTGTCCCATGTTGTTTATACCAATGGACACAAAAAAGAAAATGATGAATTTGATGCTAGTGCTCCTCCTCCATTCAAGATAGCAGATATAAGAGCTGCAATCCCAAGGCATTGCTGGGTCAAGAATCCATGGAGATCCCTCAGTTATGTTCTAAGAGATTTGGTTCTTGTTGCTACATTGTTAGCTTCAGCAATTCACTTCAATAGTTGGTTCTTTTGGCCAATCTATTGGCCTCTTCAGGGAACAATGTTCTGGGCACTCTTTGTTCTTGGTCATGATTGTGGGCATGGAAGTTTTTCAAACAATGCAAAGCTGAATAGTATTGTGGGCCATATATTGCACTCCTCAATTCTTGTACCATACCATGGATGGAGAATTAGCCACAAGACCCACCACCAAAACCATGGACATGTTGAGAATGATGAGTCATGGGTTCCATTGCCAGAGAAGATCTATAAAAGCCTAGACAATGTGACCAAACTCATGAGATTCACTGTACCTTTCCCTATTTTTGCTTATCCCTTTTACTTGTGGAGAAGAAGCCCTGGAAAGGAAGGTTCTCATTTCAATCCATACAGCAATTTGTTCTCACCAAATGAGAGAAAAGATGTTATGATTTCAACAATGTGTTGGGTTGCCATGTTTTCTCTGCTTCTCTTTCTGTCCTTCATTGTCACTCCACTTTCCATTCTCAAGCTCTATGGAATCCCTTATTTGATCTTCATCATGTGGCTTGATTTTGTCACATACTTGCATCACCATGGTTACAAGCAGAAATTACCTTGGTACCGTGGAAAGGAATGGAGTTATCTAAGGGGTGGCCTTACAACGGTGGATCGTGACTATGGTTTGGTTAATAATATTCATCATGATATTGGCACTCATGTGATCCATCATCTTTTCCCTCAAATTCCTCACTATCACTTGCTTGAAGCGACAGAAGCAGCAAAGCCAGTACTTGGAAAGTATTACCGGGAGCCAGAGAAATCTGGGCCACTTCCATTTCATCTCATAAAGTATTTGCTACAAAGCATTGGACAAGATCACTATGTCAGTGACAATGGAGATATTGTTTACTATCAATCTGATCCTTACCTTCTCAACAATAACAAGTCCAAGTAG 1128 0.406 MAVSHVVYTNGHKKENDEFDASAPPPFKIADIRAAIPRHCWVKNPWRSLSYVLRDLVLVATLLASAIHFNSWFFWPIYWPLQGTMFWALFVLGHDCGHGSFSNNAKLNSIVGHILHSSILVPYHGWRISHKTHHQNHGHVENDESWVPLPEKIYKSLDNVTKLMRFTVPFPIFAYPFYLWRRSPGKEGSHFNPYSNLFSPNERKDVMISTMCWVAMFSLLLFLSFIVTPLSILKLYGIPYLIFIMWLDFVTYLHHHGYKQKLPWYRGKEWSYLRGGLTTVDRDYGLVNNIHHDIGTHVIHHLFPQIPHYHLLEATEAAKPVLGKYYREPEKSGPLPFHLIKYLLQSIGQDHYVSDNGDIVYYQSDPYLLNNNKSK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip07g01486 375 Pfam Fatty acid desaturase 74 326 IPR005804 GO:0006629
Aip07g01486 375 CDD Delta12-FADS-like 43 311 - -
Aip07g01486 375 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 12 373 - -
Aip07g01486 375 Pfam Domain of unknown function (DUF3474) 9 63 IPR021863 GO:0016717
Aip07g01486 375 PANTHER TEMPERATURE-SENSITIVE SN-2 ACYL-LIPID OMEGA-3 DESATURASE (FERREDOXIN), CHLOROPLASTIC 12 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip07g01486 Aip-Chr7 25840380 25843512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip07g01486 13 375 Lipid Metabolism Gene Families AT3G11170 71.901 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip07g01486 K10257 - gmx:547470 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip07g01486 07 25840380 25843512 Aip07g01486 07 25840380 25843512 ECH
Aip01g00392 01 4796123 4799658 Aip07g01486 07 25840380 25843512 ECH
Aip04g02152 04 100344686 100348110 Aip07g01486 07 25840380 25843512 ECH
Aip02g02279 02 95125769 95131420 Aip07g01486 07 25840380 25843512 ECH
Aip01g00392 01 4796123 4799658 Aip07g01486 07 25840380 25843512 PCT