LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip07g01002	ATGGTGTTGAAGAGGAAGGTAGATTATGGATTCAGGGGCTTTCAGGTCCCATTTGTACCTAGATTTCCTAGATCTGTAAGAAGGAGGAGTGCCTCTAAGAAACCTGCTAAGGATGGCCGAGCTTATGCATTTGAAATACTGGCATCTGTGGCGGGCAAGTTGTTGCTTGAGGGTGAAAGTTCTGCGTCAAGCAATGCTTCTGAAGGAAATCATCAACCTGCCATTAGCCAAGGTGTTGTCGAGAAGGGAAGTCAGGACAAAGTTAGACCATTAAAAGCAGAGGAGATTCATCGTGGAAGTAGTGTGGAGAGTATTTTTATATCTGAGGCTGGAACACCAAAGAGCGGTCAGAAGCGCCTTGAGCATGCTGAGACTGATTGTGTGCTAGAGTGCATTTCAAATAATAATAATAATAATTTCGACTGTTGGGGGAAAGATGAAACTGATGTGAAGTCCGAGATTTTCAAGTTGGAGAGTAAGTTTGGACATCATTCTCATAGGTTATCGGAAGTACCTGAAGAGTCATCTGATGGTAATGTAAAAAATGGATTTAGGGTGGAACATGGGGCGAATGGTTCAGGCTTGAAGAAATCATATTTGGATAATAAGTTTAGTGTGAAGGATCAATTAGAACTGTGTGTTAACTCTCCTGCACTAATTGACACAAAAAATAATGTTAATAGTCCATATTGTAGGAAATTGTTTCCCAACATTTCCTTTCCAAGGAATGGGAATGATATTAAGTTAGGTTTTAGAGATGATGACGAAAAACTGTTAAGATGCAAAAAAGTTTGCACCAAGCCAAAGGCTTTTAGGTCTCCTCAACTCATTGCACGCCGAAAATTGAGGAAGATGCTAGCTTATAAATACTGGAAGGCTGCACCAAAGTTGAAGGATTATGAGTATTCTAGATCTGAAGAGGGAGTTAAACCACTGTATGATACGAGGAAGATTGGTTGCAGATTTGAAAGATCACAGCATAACACACTATTCAAGAGGAGGAAATTCTTTGATCGGGGTTCAGTGCTAACATCTGATGGAGGATTCAGCAGTGATAGTGTATCTAATTTGCCTAAGAAAGGAATGGATCGAGACAGCCATAGATCATCTTCAAAACTGCATGTGTCTAAGGATTCTCATGTGAAGTTCAGCATTAAGTCATTCAAGATACCAGAGCTTTATATTGATGTTCCTGAAACTGCAACTGTTGGTTCATTAAAGAGGACAGTAATGGAGGCAGTGATGACTTTACTTGGAAGCGGAATGCATGTTGGTGTTCTTGTTCAGGGTAAAAAAGTTAGAGATGACAACAGAACTCTACTGCAGACAGGTATATGCCGTAAAGAAAAGTTGAATAAACTTGGTTTCACACTGGAGCCCAATTCTATTCAAGATTCTCCAGCTGATTGTCTCGGCGATCCTTCCCAATGTGAAACATCTCAGCCTATCAGTACAGAGAACTTTGTTGAAAGTAACCACGAGCGAACAACTTCTCCGACTGACACTATAGCTGACATAACAACACCAGATTCCAGAGTGCTAGTTGCTGTTCCACCTAGGAGCCCAGAAGCATTAGCTACGGTTCCTGTGAGTCAGAAAACTAAGCGCCTCGAACTTGTACAGCGTCGAACAAGGAGACCCTTCTCTGTTTCTGAAGTAGAAGCACTTGTGGAGGCAGTTGAGGAACTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGAGCTTTTGAGAATGCAGACCATAGAACTTATGTAGACCTTAAGGATAAATGGAAAACATTAGTGCACACTGCAAAAATTTCGCCTCAACAAAGGAGAGGAGAGCCAGTTCCCCAGGATCTGTTGAATAGGGTTTTGACTGCACATGCTTACTGGTGTCACCACCAAGCCAAGCAGCATGGGCATGGCAAGAACCGGGCTCTTACCATGAAGACTCCAGAAGCTTCTGCTGAAGAACTCAGTGTTGGTGCCGTCCAACCACTTGTGATTATATAG	1995	0.4221	MVLKRKVDYGFRGFQVPFVPRFPRSVRRRSASKKPAKDGRAYAFEILASVAGKLLLEGESSASSNASEGNHQPAISQGVVEKGSQDKVRPLKAEEIHRGSSVESIFISEAGTPKSGQKRLEHAETDCVLECISNNNNNNFDCWGKDETDVKSEIFKLESKFGHHSHRLSEVPEESSDGNVKNGFRVEHGANGSGLKKSYLDNKFSVKDQLELCVNSPALIDTKNNVNSPYCRKLFPNISFPRNGNDIKLGFRDDDEKLLRCKKVCTKPKAFRSPQLIARRKLRKMLAYKYWKAAPKLKDYEYSRSEEGVKPLYDTRKIGCRFERSQHNTLFKRRKFFDRGSVLTSDGGFSSDSVSNLPKKGMDRDSHRSSSKLHVSKDSHVKFSIKSFKIPELYIDVPETATVGSLKRTVMEAVMTLLGSGMHVGVLVQGKKVRDDNRTLLQTGICRKEKLNKLGFTLEPNSIQDSPADCLGDPSQCETSQPISTENFVESNHERTTSPTDTIADITTPDSRVLVAVPPRSPEALATVPVSQKTKRLELVQRRTRRPFSVSEVEALVEAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQDLLNRVLTAHAYWCHHQAKQHGHGKNRALTMKTPEASAEELSVGAVQPLVII	664

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip07g01002	664	PANTHER	TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED	484	648	-	-
	Aip07g01002	664	PANTHER	TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED	1	485	-	-
	Aip07g01002	664	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	541	599	IPR017930	-
	Aip07g01002	664	SUPERFAMILY	Homeodomain-like	546	626	IPR009057	-
	Aip07g01002	664	MobiDBLite	consensus disorder prediction	469	500	-	-
	Aip07g01002	664	ProSiteProfiles	Myb-like domain profile.	540	595	IPR001005	-
	Aip07g01002	664	MobiDBLite	consensus disorder prediction	61	88	-	-
	Aip07g01002	664	Gene3D	-	533	637	-	-
	Aip07g01002	664	PANTHER	TELOMERIC REPEAT BINDING PROTEIN	484	648	IPR031105	-
	Aip07g01002	664	PANTHER	TELOMERIC REPEAT BINDING PROTEIN	1	485	IPR031105	-
	Aip07g01002	664	MobiDBLite	consensus disorder prediction	61	79	-	-
	Aip07g01002	664	SMART	sant	544	597	IPR001005	-
	Aip07g01002	664	MobiDBLite	consensus disorder prediction	347	373	-	-
	Aip07g01002	664	CDD	SANT_TRF	546	596	-	-
	Aip07g01002	664	MobiDBLite	consensus disorder prediction	473	500	-	-
	Aip07g01002	664	SUPERFAMILY	Ubiquitin-like	377	452	IPR029071	-
	Aip07g01002	664	MobiDBLite	consensus disorder prediction	358	373	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip07g01002	Aip-Chr7	12820347	12823629	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip07g01002	-		-	lang:109356744	766.533

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip04g01831	04	80738976	80743313	Aip07g01002	07	12820347	12823629	ECH
	Aip03g00488	03	4725171	4729840	Aip07g01002	07	12820347	12823629	ECH
	Aip07g01002	07	12820347	12823629	Aip07g01002	07	12820347	12823629	ECH