Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g01831 ATGGTGTTGCATAAGAGGTTGAACTACAGCTTTGATGGCTATCATGTGCCTGTCATTCCTAGAGCTTCAAGATCTGTTAGGGGGAGAGGTTCCATCCGGAAGAAGCGCGACAACAGTCACATACATGCTTTTGAAATTTTAGCTAGTGTAGCTGGCAATTTCTTGCATGCAAACGAGAGTTCCAACCCTGAAAACACTTCTTTTGCAAAAGAAGCTGATCTTTTTCATGGTAATAATGTAAAGGAGAAAGAGAATGATGAAACAGGGTTGTTTAAGGGGGACCTTTTCACACACGGGACGTGTAGCAAAATTACCACTACTTGTGTCCCTAGTTTGCAAGGAGAACATGACAACCAAAGGTACATGTCTAAATACCATATTGAAGGCCAAGGACAAAATGTCCTTGAGAGGGAAGATGGAGGCATGAAAAGAAGAAATTCTAATGAGAAAATCATCCATATCAAAGGCAGTTATGTCGGAGTTAATGAACCAGGTCATAAGGTATTTAAAGATTGCACTTTGGAAAATAATGTGGAAAAGCCTTTGCCAGAGTGTCGCAATCATCTTGATTCTTCGCACGGCGGTTCCATTGCTAGGAAATTAGTTAATACAGATAATGACGAAAACTTTGCTCGGTGCACTCAATCAAACTTGAGGAATAAGATATCGAGTCCACCATTAGACACACCAAAACTGAAGGATGCAAGTCCTATTGCAAGTGATGAGAACAATAGTAGAGACAACTCTGAACTTGAAAATTTACAACGCATGTATCCATTTAAGAAGAGGAAGTTCTTTAATCAGACCTCATCATCCACATCCGATAGAGGCTCTCAGTGTCAAGGCGTATTTGATTTTTCAGACAGCAAAGTTAATAGCACAATCCATGGGATTGAAGAATCGTCCTCTATAGCTGGTCAACAGGTTCATCCTGGATCCAAGGGTTGTAATGTGAAGCTTAGCATAAAATCCTTCAAAGTCCCGGAGCTTTTCATTGATATACCAGAAACTGCAACAATTGGATCACTGAAGAGGACAGTGATGGAGGCTGTGACAACTATACTAGGAGATGAACTACATATCGGCATCCTTTTGCAGGGAAAAAAGATTCGAGACGACAACAAAACTCTTATTCAGACAGGGATATGCCAAGATGACAAACGTCATAGGTTAGGGTTCATGTTGGAGCCAAGACATACTAGGATTTCTTCACCTTCATACAATGAAGACCCTTGTTATTTAACTTCTAGTCCACAACAAAAGTTATCTAGGCAATCAACATCATTAATGTTCCAACAGGGAACATATAATGTATCTCAAGAACGCTCTCTGATCAAAATTGAAAGTTGTGCTGAAGGTGATCTCAAATTGTCCTCCTCTGTAGCAGATACTTCAGCTAACAATAACATGTCCAAGTGTCGTGCTCTAGTAGCAGTTCCTGCCATTAACATGCAAGCATTAGCTGTGGTCCCATTACGACGCAAATCTGGGAATCCTGACTTCGGACAGCGTCGAATTAGGAGGCCTTTCTCTGTTCTTGAAGTAGAAGCATTGGTTCAAGCAGTTGAAAAACTTGGAACTGGAAGGTGGCGCGATGTCAAACAACGTGCTTTCGATCATGCAAAGCATCGAACTTACGTGGATTTGAAGGATAAATGGAAGACATTGGTGCACACAGCGAGAATCTCCCCTCAGCAAAGAAGAGGAGAACCTGTACCTCAAGAGCTTTTAGATAGGGTCTTAGCCGCACACGCGTATTGGTCTCAACAACAGTGCAAGCACCAACTTAAACCTTTGTAA 1800 0.4144 MVLHKRLNYSFDGYHVPVIPRASRSVRGRGSIRKKRDNSHIHAFEILASVAGNFLHANESSNPENTSFAKEADLFHGNNVKEKENDETGLFKGDLFTHGTCSKITTTCVPSLQGEHDNQRYMSKYHIEGQGQNVLEREDGGMKRRNSNEKIIHIKGSYVGVNEPGHKVFKDCTLENNVEKPLPECRNHLDSSHGGSIARKLVNTDNDENFARCTQSNLRNKISSPPLDTPKLKDASPIASDENNSRDNSELENLQRMYPFKKRKFFNQTSSSTSDRGSQCQGVFDFSDSKVNSTIHGIEESSSIAGQQVHPGSKGCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTTILGDELHIGILLQGKKIRDDNKTLIQTGICQDDKRHRLGFMLEPRHTRISSPSYNEDPCYLTSSPQQKLSRQSTSLMFQQGTYNVSQERSLIKIESCAEGDLKLSSSVADTSANNNMSKCRALVAVPAINMQALAVVPLRRKSGNPDFGQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHQLKPL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g01831 599 CDD SANT_TRF 508 558 - -
Aip04g01831 599 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 502 561 IPR017930 -
Aip04g01831 599 ProSiteProfiles Myb-like domain profile. 502 557 IPR001005 -
Aip04g01831 599 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 599 - -
Aip04g01831 599 SUPERFAMILY Ubiquitin-like 313 392 IPR029071 -
Aip04g01831 599 MobiDBLite consensus disorder prediction 215 253 - -
Aip04g01831 599 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 599 IPR031105 -
Aip04g01831 599 Gene3D - 497 598 - -
Aip04g01831 599 SMART sant 506 559 IPR001005 -
Aip04g01831 599 SUPERFAMILY Homeodomain-like 508 589 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g01831 Aip-Chr4 80738976 80743313 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g01831 - - gmx:100807254 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip04g01831 04 80738976 80743313 Aip07g01002 07 12820347 12823629 ECH
Aip04g01831 04 80738976 80743313 Aip04g01831 04 80738976 80743313 ECH
Aip04g01831 04 80738976 80743313 Aip03g00488 03 4725171 4729840 ECH