Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip06g03353 ATGTATTCTAGATGTTGCTTTTTAGCACATTTTGGTGTATGCTCTGGGAAGAAACCGTGCTGGTCATTTTTACTGTTTTGTTGTGCCTGTTTTCGCGTTCTCTTGCTTTCTTCTATGGAAAAGTTAAAGCTCAAATGCAAGGGGGTTTTCTGTAGCAGAGGTTGCCTTGGATGCTTCACAAAACCTTCAGTAACTATTCCAATGGATGAGCCATCTAAAGGACTAAGAACTCAAGGTCAAACAGTAAATAAAGACAACAGAACAGAAGATATCTGGAGCAGCAGCACTTTTGAAATGGATAATAGTGCTGCACAGTCCCAGAGAAGCATCTCATCGATCGTAATGTCAAATAATCCTTCTGATCCTCAAAGTAGTACCGGGAGTGAAATTGGTCCGGCTGAATTTGTCAACCATGGCAATTTCACCTGTGCAGGTCTTCTTCTCTGGCATCAGATAAGACAGCAATGGGTTGGGAATAAAATCTCCGAGAGTCAGAAGGAAGTTCGAGAACCGAGAATAAGTTCGAACGCCACCTACGACAACCTTCTCGGAAACAACAAACACTTTCCTCAACCAATCCCTCTGAGAGAAATGGTTGACTTTCTTGTTGATATTTGGGAGCAAGAGGGTCTATATGACTGA 642 0.4221 MYSRCCFLAHFGVCSGKKPCWSFLLFCCACFRVLLLSSMEKLKLKCKGVFCSRGCLGCFTKPSVTIPMDEPSKGLRTQGQTVNKDNRTEDIWSSSTFEMDNSAAQSQRSISSIVMSNNPSDPQSSTGSEIGPAEFVNHGNFTCAGLLLWHQIRQQWVGNKISESQKEVREPRISSNATYDNLLGNNKHFPQPIPLREMVDFLVDIWEQEGLYD 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip06g03353 213 Pfam Protein of unknown function (DUF4050) 174 213 IPR025124 -
Aip06g03353 213 Pfam Protein of unknown function (DUF4050) 95 171 IPR025124 -
Aip06g03353 213 MobiDBLite consensus disorder prediction 108 130 - -
Aip06g03353 213 PANTHER DUF4050 FAMILY PROTEIN 13 213 - -
Aip06g03353 213 PANTHER OS07G0479600 PROTEIN 13 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip06g03353 Aip-Chr6 130281008 130284215 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip06g03353 - - gmx:100818696 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g03353 06 130281008 130284215 Aip06g03353 06 130281008 130284215 ECH
Aip06g03353 06 130281008 130284215 Aip09g00236 09 2134185 2136226 ECH
Aip06g03353 06 130281008 130284215 Aip08g00073 08 433529 435775 ECH
Aip06g03353 06 130281008 130284215 Aip08g03072 08 120438406 120443385 ECH
Aip01g02986 01 132242106 132245499 Aip06g03353 06 130281008 130284215 ECH