Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g00073 ATGGGTGCTTGTCTTGGACGATATAAGCAGCCCACATTAATCAGTTCTGTGGATGTGCCACCAAAAGGATTGACAAAGCAAGGTAAGCCGGTGAAGAAACCTAGCACATCAGAAGATTTCTGGACCACCAGCACGTATGATATGGACAACAGTGCTGTTCAGTCACAAGGAAGCATCTCATCAACCAGTGTAACAAACCAAGCTGCAGATCCTGGCAACCCTGCTGATTTTGTGAATCATGGTCTTATTCTCTGGAATCAGACTCGACAACGTTGGATTGGAAATAAGAAATCTGAGAACCAAGCACAACAATTGCGAGAACCCAAATTGAGTTGGAATGCAACGTATGAAAGTTTATTGGGGAGTAACAAGCCATTCCCCCAGCCTATCCCTCTTGCGGAAATGGTAGATTTTCTTGTGGACATTTGGGAACAAGAGGGCCTCTATGACTGA 453 0.4481 MGACLGRYKQPTLISSVDVPPKGLTKQGKPVKKPSTSEDFWTTSTYDMDNSAVQSQGSISSTSVTNQAADPGNPADFVNHGLILWNQTRQRWIGNKKSENQAQQLREPKLSWNATYESLLGSNKPFPQPIPLAEMVDFLVDIWEQEGLYD 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g00073 150 Pfam Protein of unknown function (DUF4050) 44 108 IPR025124 -
Aip08g00073 150 Pfam Protein of unknown function (DUF4050) 109 150 IPR025124 -
Aip08g00073 150 PANTHER OS07G0479600 PROTEIN 3 150 - -
Aip08g00073 150 MobiDBLite consensus disorder prediction 18 37 - -
Aip08g00073 150 PANTHER DUF4050 FAMILY PROTEIN 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g00073 Aip-Chr8 433529 435775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g00073 - - adu:107459559 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g00236 09 2134185 2136226 Aip08g00073 08 433529 435775 ECH
Aip01g02986 01 132242106 132245499 Aip08g00073 08 433529 435775 ECH
Aip06g03353 06 130281008 130284215 Aip08g00073 08 433529 435775 ECH
Aip08g00073 08 433529 435775 Aip08g00073 08 433529 435775 ECH
Aip08g00073 08 433529 435775 Aip09g00236 09 2134185 2136226 PCT