Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g03072 ATGCCAGCAATTCTTTTGGTGGACGAGGCATCCGTAGGACTAATACCTCATGACCAAGCTGCAAGGAAAGACAGCAGATCAGAAGATTTCTGGAGCAGCAGCACTATTGACATCGAATATGCACTTCGGTCCCAGAGGAGTGCCTCATCAATTGGCATATCCTTTGATCCTCAAAATAGTGCTGCCCTTGCGAACGATCATCCTGAATTTGTCAATCATGGTCTTATTCTCTGGAACCAGATGAGGCGACATTGGGTTGGAAATCTAAGGCAGCAAAGGCGGAAACAAGTTGGAGAACCCAGATTAAGTTGGAATGCAACCTATGAGAATCTCCTTGGAACCGACAAGCCTTTCCCCCAACGAATTCCCTTGGGAGAAATGGTTGACTTTCTAACTGATATTTGGGAGCTAGAGGGTCTATATGACTGA 429 0.4592 MPAILLVDEASVGLIPHDQAARKDSRSEDFWSSSTIDIEYALRSQRSASSIGISFDPQNSAALANDHPEFVNHGLILWNQMRRHWVGNLRQQRRKQVGEPRLSWNATYENLLGTDKPFPQRIPLGEMVDFLTDIWELEGLYD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g03072 142 PANTHER OS07G0479600 PROTEIN 16 142 - -
Aip08g03072 142 PANTHER DUF4050 FAMILY PROTEIN 16 142 - -
Aip08g03072 142 Pfam Protein of unknown function (DUF4050) 101 142 IPR025124 -
Aip08g03072 142 Pfam Protein of unknown function (DUF4050) 39 97 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g03072 Aip-Chr8 120438406 120443385 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g03072 - - ahf:112772292 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g03072 08 120438406 120443385 Aip08g03072 08 120438406 120443385 ECH
Aip06g03353 06 130281008 130284215 Aip08g03072 08 120438406 120443385 ECH
Aip01g02986 01 132242106 132245499 Aip08g03072 08 120438406 120443385 ECH