Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00625 ATGGATCACAAGTCTTGGCTTTGGAGGAAAAAGTCCTCGGAAAAGGCAGCAACTGACAAAGCAAATAACACTTCAAAAGAAAACGAGGAGGTAATTTGTTTGGTTGAGAATAAAAAGGTACAGGCACTTCTAGCAGAAAAAGAAGAATTGGAAAAAGATTTGAAAAGATTGAATGATAAGCTTGCTTCTACAATTTCCGACAATAAGTTGAGAGATGAGCAGGTGAAGAAACAAACAAAAATTGCACAAGAAGCAGTGACAGGATGGGAGAAGGCAGAAGCCGAAATGGTGTCTATGAAGCAATATCTTGAAGAATCAATGCAGCAGCAAATAGTTTATGAAGAAAGAGTGAGCCATCTGGATGGTGCTCTCAAGGAATGTATGCAACAGTTGCGTTTTGTTAGAGAAGAACAAGAGCAACGAATTCAAGATGCTGTCATGAAGGTTTCAAAAGAATTTGAACAAGCACGCTTGGTTTTGGAGGAGCAGCTATCAGAGACCACTGAAGAGCTTGCTAGATCAGCCCTTGAAAATGCTCATCTTAATAAATCTATTCTTGCAAAAGAAAATTTGATTGAAGATCTGAAAAGACAATTGACTCAGGCAGAGGCAGATCATAATGGACTGATGATTAAGTTGGAGTTTGCCGAGAAAGACAACACATCTCTAAAGTATGAGGTTCGAGTGCTTGGCAAGGAACTTGAGATCCGAAATGAGGAGATTGAATTTAATCGCAGAACAGCTGATGCTTCTCATAAGCAGCACCTAGAGAGTGCCAGAAAAATTGCCAAGTTAGAATCAGAATGTCAGAGATTGCGTCTTTTGGTTCGAAAAAGGTTACCAGGTCCGGCAGCCTTGGCGAAAATGAAGAATGAAGTTGAAATGTTGGGATGGGAATCACTTGATGTGAAGAAGAAAATGGTAAACTCATCCAATGTAATTGAATCTTCAGTGGACAATCCCCTTGAGGGTACCAATAGAAGAATCACTACCTTAACTGAGCAACTACGTGCTGTGCAAGAAGAAAACAAGACTTTGAAAGAGTCCCTTAATAGGAAAGCCAGTGAACTCCAATTCTCAAGATCAATGCTTGCCCGCACCGCCTCAAAACTATTGCAACTTGAGTCACAGATCGAAGAATTCTCCAAAGGTCAAGTAGCATTGGAGCAGCCTAGAAGTATTCTTGCATCACACGAGTTCTCTTTGGCATCAATGTCTGACGTTAGCAGTGATGATAAGGTTAGCTGTGCTGAGTCTTGGCCTTCTGCATTGGTCTCAGAGTTGGAGATCCTCAGAAGTGCAAAACAGAAGGAACTATTGTCATGCAGAAGTGTTGGAAGCTCAGACATAAACCTTATGGATGACTTCATTGAAATGGAAAAATTAGCAGTTATCTCTGTTGAAAAAGCCTCTGAACCTTCTCATGCTTCTTTAGAAGCAGATAGTGGAATAAAGGATCTCTCAGAGACTGGACCAGATGAAAATATCTCTGAAGTAGTTGGTAAGGAGATCATTCCGGTGTCTGATCATACGGCTGACTTTGCAACATCAAACCATGAAACCTGTTCCGGTGACATTTTCGAGGGCAACATTCCTGGTTGGCTTCATCATGTTGTAAAAATGATCTTGGAGCGAAACTTCGTCACTCATAAGACCCTTGATGATATAACTGAGGACATCAAAGTTGCTTTGGGGTGTCTAAACAATTCAGACCAATGTGAGTTTCATTCAAGCAAAACCCGTGGTCATTTTGAAACAACAGATAAACCTCAAAGTAATTCTCTTGTACCCCAATCTGGTGAAGTAGATGTTGCTGAGATCTCATCAATAAAGAGTAGAAAACAAGAAACTGGGACTGATCTGAGTAAATCCATTAGCAAGATAGTTGAACTTATTGAAGGGATCAGCATGCCTGCTGAGGCTTATGATGATTCAAATCCCCTTTGTAGAAGAGATGGAAGTTCAGACAATAATCTAGAAACGACGACAGACTACATGGTCCGTGTTCTCCAGTGGAAAACATCTGAACTTAATAATGTCTTGCAGCGATTTCTCCATCTGTGTTATGAACTACTGAATGGCAAGGCTGATATTGAAAAATTTGTTGCAGAACTGACCACAACTTTGGATTGGATTATGAATCATTGCTTTTCTCTTCAGGATGTTTCTAGTATTAGGGATGCTGTTAAGAAACAATTTGACTGGGATGAGACACGAAGTGAAAATGAAGCTGAAATTAGGATGACAAGTCATTTTCCAGAAGTAGATAAGTTGCATCTTCCCAAACAACAGTTGTCATGTGTGCCACTGCTAACTAATTCCGATGGCCATGATTATCAGACCAAAGCGATGAAAAATGATCATAAGGAAGAGTTTAAAAGTGTTAATGAGGTCAATTGTGAAGCCGAAAAGGAAGTCTTGGAAAGTAGCCTTCAAACTGCTGCTAGGAGAACAGAACCCATAATGAATCAACTTCAGGAATCAGAGAAAACTATTGCCAGTTTGAGATTGGAGCTACAAAACCTGAAAGAATCCAATAAAGCACTTGAAGGTCAAATTCAAAATGAAACATCGATAAGTGCGGATGTTGATTTTCAGTTTACAGAAGCTGAATTAAAAGAGGCTCATCACAAGGTTTTGGCATTAGAAGTGGAACTAGAGAACAAGAACCATCATTGTGAAGAATTAGAGGCCAGATGTATTGAACTTCAGCTCCAGCTTGAAAGCATGACAAAGGAGTGCTCAAAAGATGACATTCTTCAGAAAGATAAACCACTACAAAGTGACTGGGAGATAACAGCTGCAACAGAAAAGTTAGCAGAGTGTCAAGAAACCATCCTTAACCTTGGGAAGCAGTTGAAGGCATTAGCTTCACCAAATGATGCATCCTTTTTTGACAATGTCACCGCCGTCGAGCATAACACAACCACAAGCATAATTACTGTCCCCCCAAAAGGCATAAAAGTGAAAAGTCGATCTTCTCTACTCGATCAGATGCTGGCTGACAATGACACCAAACTAAAGGTTGACATAGCAAGTGACAGAGGCTCTTGTCCCTCTAGCATGACAGATTTTGTACAGCCCCTAGAAAAGATTTTGGTTCTGAATGGACTTAAAGGTCAGGATGAGAGCTCCAGTGTTAACTCTTTGGCCATTGTTCGTGCTAAGAAATCAGGAGGTCGAAGCTTATGGAAGAAGCTATTAGGGAGGAAGAAGAAAGCCAAAAAGAAGACACATTTTCTGTTTAACACATAA 3255 0.4025 MDHKSWLWRKKSSEKAATDKANNTSKENEEVICLVENKKVQALLAEKEELEKDLKRLNDKLASTISDNKLRDEQVKKQTKIAQEAVTGWEKAEAEMVSMKQYLEESMQQQIVYEERVSHLDGALKECMQQLRFVREEQEQRIQDAVMKVSKEFEQARLVLEEQLSETTEELARSALENAHLNKSILAKENLIEDLKRQLTQAEADHNGLMIKLEFAEKDNTSLKYEVRVLGKELEIRNEEIEFNRRTADASHKQHLESARKIAKLESECQRLRLLVRKRLPGPAALAKMKNEVEMLGWESLDVKKKMVNSSNVIESSVDNPLEGTNRRITTLTEQLRAVQEENKTLKESLNRKASELQFSRSMLARTASKLLQLESQIEEFSKGQVALEQPRSILASHEFSLASMSDVSSDDKVSCAESWPSALVSELEILRSAKQKELLSCRSVGSSDINLMDDFIEMEKLAVISVEKASEPSHASLEADSGIKDLSETGPDENISEVVGKEIIPVSDHTADFATSNHETCSGDIFEGNIPGWLHHVVKMILERNFVTHKTLDDITEDIKVALGCLNNSDQCEFHSSKTRGHFETTDKPQSNSLVPQSGEVDVAEISSIKSRKQETGTDLSKSISKIVELIEGISMPAEAYDDSNPLCRRDGSSDNNLETTTDYMVRVLQWKTSELNNVLQRFLHLCYELLNGKADIEKFVAELTTTLDWIMNHCFSLQDVSSIRDAVKKQFDWDETRSENEAEIRMTSHFPEVDKLHLPKQQLSCVPLLTNSDGHDYQTKAMKNDHKEEFKSVNEVNCEAEKEVLESSLQTAARRTEPIMNQLQESEKTIASLRLELQNLKESNKALEGQIQNETSISADVDFQFTEAELKEAHHKVLALEVELENKNHHCEELEARCIELQLQLESMTKECSKDDILQKDKPLQSDWEITAATEKLAECQETILNLGKQLKALASPNDASFFDNVTAVEHNTTTSIITVPPKGIKVKSRSSLLDQMLADNDTKLKVDIASDRGSCPSSMTDFVQPLEKILVLNGLKGQDESSSVNSLAIVRAKKSGGRSLWKKLLGRKKKAKKKTHFLFNT 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00625 1084 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1079 - -
Aip05g00625 1084 MobiDBLite consensus disorder prediction 1 25 - -
Aip05g00625 1084 Coils Coil 150 170 - -
Aip05g00625 1084 Pfam Filament-like plant protein, long coiled-coil 71 963 IPR008587 -
Aip05g00625 1084 Coils Coil 33 67 - -
Aip05g00625 1084 Coils Coil 178 219 - -
Aip05g00625 1084 Coils Coil 825 859 - -
Aip05g00625 1084 Coils Coil 322 356 - -
Aip05g00625 1084 Coils Coil 879 913 - -
Aip05g00625 1084 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 1079 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00625 Aip-Chr5 7728718 7733861 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00625 - - ahf:112748554 1870.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00625 05 7728718 7733861 Aip01g00977 01 18931069 18937470 ECH
Aip05g00625 05 7728718 7733861 Aip05g00625 05 7728718 7733861 ECH
Aip10g01872 10 54508671 54513647 Aip05g00625 05 7728718 7733861 ECH
Aip05g00625 05 7728718 7733861 Aip01g00977 01 18931069 18937470 PCT