Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01872 ATGAACAATAAACCATGGCTTTGGAGGAAAAAATCTATGGAGAAGACAATCTTTGCAATGGACAAAGGTGTAAGCCCTCCTGGAACCAATGAAGAAGGGGTAAATAAACAGCCAACAGATATAAAACCTGGATTGGAAAGATCACCGGAAAGTCCAGACAAGAAGTTGGCAACAGTTCTCCTTGATTACCACGCCGGAAACGATCCTTCCATGGAACGCAACCATAGGCCCCAACAAGAAATTAGAGGCATGGAAGGGGCAGAACAAGTCGAATCTGCCAATGATTCAGATAAAGGATCACCTGCTGAAACCGTAACTTCAACCAATGCAACATGCCATGAACCTTTTCAGCAACCAAGTTATATTCAAGAACAAGAGCAGATTCAGAAAGAACTGGAAGAGAAGTTGAGAGAATCAAGTAAAAGGATAGCCGAGTTAACTGCTGAGAATGCTCATCTAGCTAATGCCTTACTAGTCAAAGAAAAATCTATTGAGGACTTGCTTCAATGCAAACAACAAGCAGAAGCAGAGTTTACTACCTTGATGGCAAGGTTAGATGCCACTGAGAAGGAAAATGTTTTCCTCCGATATGAGTTTCACGTGCTGGAAAAGGAACTTGAGATCAGGAAGGAGGAGATCAACTATAGTCGTCAGTATGCAGATGACTCGCATAAACAATATCTTATAAGTGCTGAGAATGTCTCAAAGTTGGAAGCCGAGTGCCAGAGACTCCACACGCTGCTGCATAAAAGCTCACCTGGTCCTGCTAATTTAGTGAATACGAAAAATGAAGCCAGAAAGACGAGGAGGGAGACAGATATGAGAAGAAAAAAGCCTAATCCTACCAGAGATTTGGTTTGCAAGAACAATGATATTAGAAACTCTACCAAAGTATCCGAGAAGAGCATCGGCTTGGTGTTCAAACGGTTACAAGATCTGGATGAGGAAAACAAGGCTCTGAAAAGAATTTTAACCCAGAGAAATACTGAACTAGATTCATCAAGAATCATGTATGCTGAAACAGCTTCCAGATTATCACAGGCTGAGATTTTGCTCAGGAAGTTTTCTGAGAATCAGAAGTCCATGGAGCTAGCAAAGTATTATCCCACATCAAGTGAACTTTCTTTAATATCAAAATTTGATGTTGCTAGTGATGATGGAGCGATCTCTACTGGATCCTGGGCAAATGCTCTTATTTCAGAACTTGAGCATTTGAGAACTGCAGAGGGTGAATGGCATAAGAACATGAGTTTCTTCATGGATGACTTTGTTGAGATGGAGAAACAAGCCATAGTTTCGGTTGATACTCCTAAAAGAGGATACTGCTCTGATACAAGTGGGAGGGAACTGGTGCCAGTTGAACAAGATATTAGCTTCACTGAAGGGGAACAGCAGAATCAATTCAAACATCCATCTGAGAGATCATTTGATTGGCTACAAGTTGTTTTGAATGCAATCTTGGAAGAGAGCCGCTTATCAAAACGAAGCCTTGATGAACTGTTTGATGACATAAAAATTGCTTTTGGTTGCATGAATCACCCAACAACCTGTAAACCTGATAACAGTTTCAGTGGTTCTGGGGAAGCAAAAAGTTCCAAACAATGTGACTCTCATTTGAGAAAGTCAATACATAAAATTATCAAGCTCATTGAAGGAATCGCTCCCGAATCATTCATCTGTAACAACTCTTCAGATTGCTTGGAGGATAACTCGCATTCTAACATATCTCATTCACCAACATCTAAAGAATACTTTGTTCATGTTTTCCAATGGAAGGTTTCAGACTTGAATCCTCTTCTGCATCAACTTGTTCATACCTGCAAAGATTTGCTAACAGGGACAGCAAATTCGGAAAATTTTTTTGAGGAGGTAGCATTTGCTTTGGAGTGGAGCATCAATAACTGTGCCACCTCCACAAATGCTTCAATTGCAAGAGATAAGATCAGGAGGCATTTTGGCTCTCTTCTGTCCAAAATTGATACCGGGAATCAAAGAGATTGTGATGATAAACAGTCTTTTCGCTCCACCTCGGGTGCTTATTCAGATGACCAAGGTGTATGCCTCAACACACAGAAAAATCAGTATGACCCCATTGAAGAAAATAGGAAGTTGAAAGAGGATCTGAGATGCACAATATCTGCAAAGAAGGACGTGGAAGCCAAGCTGACCGAGGCGAATCAGAACTTGACAAAACAGTGTCAAGAAGCACAGAATAGTATCAAAGGTTTAGAATCAGAAATGGCAACATTGAGAGAATCCAAAGGAATAATTGAAGATCAGATTGAAAAACAGAAGATGATAAATGAAGATCTTGACACCCAGCTTACCATAGCACAAGCCAAGTTAAATGATTTCTGTCAAAAGTTCTCATCCTTAGAAGTCGAATTGGAGGATAAAAAGAACTCCTGTGAAGAATTAGAAGCAACTTGTCTTGAGCTTCAGCTCCAGCTGGAAAGCATTGCGAAGAAAGATGCTCCAATATATGGTAGATGTGATGCGGAAAAGATATATCAAACTGGCTGGGAGATCACAACAGCTTCATCAAAGTTGGCGGAGTGCCAAGAAACCATCCTCAACCTTGGGAAACAACTCAAGGCACTTGCTTCGTCTAATGAAACAGCACCTTTTGACAGGGTAGTCTCTGCGACTAGTACTACTATGGCCAATCCTACTCAAAAGAAGAACCTGGTCAAACGATCTTCTCTACGCAACCAAATGCAAGCTGAGGATGATGCTATGGCAGAGATCCATGATCCTGTTCAAGTTGGAGAGAGTGAATGCAGTAAAGATACAGATAAGCCACCCCTTCTTCAATCCGAAGAGGATAGTGCTATGCATGGTCCAGAAGTCATAGCTAATGCTTCACAACCAAGTGTTACATCAGAGCAAAATGATAGAAGCATTGCTGCTATGGGGTCTCTGGCAATTGTACCGAGTAAAAAACAAGGAAGCCTTGGTTTTCTGAAGAAGCTACTACTAAGACAAAAGAAAGGGAAAGTTAAAGGCACTAAGATATTGGTAAAATGA 3027 0.409 MNNKPWLWRKKSMEKTIFAMDKGVSPPGTNEEGVNKQPTDIKPGLERSPESPDKKLATVLLDYHAGNDPSMERNHRPQQEIRGMEGAEQVESANDSDKGSPAETVTSTNATCHEPFQQPSYIQEQEQIQKELEEKLRESSKRIAELTAENAHLANALLVKEKSIEDLLQCKQQAEAEFTTLMARLDATEKENVFLRYEFHVLEKELEIRKEEINYSRQYADDSHKQYLISAENVSKLEAECQRLHTLLHKSSPGPANLVNTKNEARKTRRETDMRRKKPNPTRDLVCKNNDIRNSTKVSEKSIGLVFKRLQDLDEENKALKRILTQRNTELDSSRIMYAETASRLSQAEILLRKFSENQKSMELAKYYPTSSELSLISKFDVASDDGAISTGSWANALISELEHLRTAEGEWHKNMSFFMDDFVEMEKQAIVSVDTPKRGYCSDTSGRELVPVEQDISFTEGEQQNQFKHPSERSFDWLQVVLNAILEESRLSKRSLDELFDDIKIAFGCMNHPTTCKPDNSFSGSGEAKSSKQCDSHLRKSIHKIIKLIEGIAPESFICNNSSDCLEDNSHSNISHSPTSKEYFVHVFQWKVSDLNPLLHQLVHTCKDLLTGTANSENFFEEVAFALEWSINNCATSTNASIARDKIRRHFGSLLSKIDTGNQRDCDDKQSFRSTSGAYSDDQGVCLNTQKNQYDPIEENRKLKEDLRCTISAKKDVEAKLTEANQNLTKQCQEAQNSIKGLESEMATLRESKGIIEDQIEKQKMINEDLDTQLTIAQAKLNDFCQKFSSLEVELEDKKNSCEELEATCLELQLQLESIAKKDAPIYGRCDAEKIYQTGWEITTASSKLAECQETILNLGKQLKALASSNETAPFDRVVSATSTTMANPTQKKNLVKRSSLRNQMQAEDDAMAEIHDPVQVGESECSKDTDKPPLLQSEEDSAMHGPEVIANASQPSVTSEQNDRSIAAMGSLAIVPSKKQGSLGFLKKLLLRQKKGKVKGTKILVK 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01872 1008 MobiDBLite consensus disorder prediction 922 946 - -
Aip10g01872 1008 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1002 - -
Aip10g01872 1008 MobiDBLite consensus disorder prediction 250 291 - -
Aip10g01872 1008 MobiDBLite consensus disorder prediction 93 120 - -
Aip10g01872 1008 Coils Coil 171 191 - -
Aip10g01872 1008 MobiDBLite consensus disorder prediction 68 82 - -
Aip10g01872 1008 Coils Coil 310 330 - -
Aip10g01872 1008 Coils Coil 122 156 - -
Aip10g01872 1008 MobiDBLite consensus disorder prediction 263 284 - -
Aip10g01872 1008 Coils Coil 715 760 - -
Aip10g01872 1008 MobiDBLite consensus disorder prediction 18 120 - -
Aip10g01872 1008 Coils Coil 789 823 - -
Aip10g01872 1008 SUPERFAMILY Tropomyosin 691 829 - -
Aip10g01872 1008 PANTHER FILAMENT-LIKE PROTEIN (DUF869) 1 1002 - -
Aip10g01872 1008 MobiDBLite consensus disorder prediction 922 939 - -
Aip10g01872 1008 Pfam Filament-like plant protein, long coiled-coil 123 872 IPR008587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01872 Aip-Chr10 54508671 54513647 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g01872 - - gmx:100810631 1231.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g01872 10 54508671 54513647 Aip10g01872 10 54508671 54513647 ECH
Aip10g01872 10 54508671 54513647 Aip05g00625 05 7728718 7733861 ECH