Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip01g00977 ATGGATCACAAACCATGGCCTTGGAGGAAAAAATCCTCAGAAAAGATAACCGTAACGACAGACAATACCAATCTCACTTCAAAAGAAAACCAAGAGGTACAGGCTCTTCTAGCTGATAAAGAAGAATTGGAGAAAGACTTGAAAAGACTAAATGATAAGCTTACTTCGGCACTCTCTGACTGTAATGCTAAAGGTGAGCTGTTGAAAAAGCAAACAAAAATTGCTCAGGAAGCAACAGCAGGTTATGAGCAGGCAAAAGCTGAGGTGTTGTCTATGAAGCATGATTTTGATGAAGCTTTGCAGCAGAGATTAATTTATGAAGAAAGAGTAGTCCATTTGGATGGAGCTCTCAAGGAATGTATGCAACAGTTACGTTTTGTTCGAGAAGAACAAGGGCGAAGGGTTCATGATGCTGTGATGAAGGCTTCAAAAGAATTTGAAAAAGAGCGCATGGTTCTGGAGGAGCAGTTATCTGAGGTAGGTAAATGGCTAGCAAAAGCGGAGACTGAAAATTCTCATCTTAATAAGTCCATTCTTGCAAAAGAAAATCTGATTGAAGATCTGAAAAGACAATTGAATCAAGCTGAGGCAAATCATAATGCACTGATGATTAGATTAGACTCTATTGAAAAAGAAAATGCCTCTTTCAAGTATGAGGTTCGAGTCCTTGAAAAGGAACTTGAGATCCGAAATGAAGAGAGAGAGTTTAATCGCCGGACGGCTGATGCTTCTCACAGACAGCACTTAGAGAATGTTAAAAAAATTGCCAAATTAGAATCAGAATGTCAGAGGCTGCGGCTTCTGGTTCGGAAACGATTACCAGGTCCTGCTGCCCTGGCAAAAATGAAAAATGAAGTTGAAGTTTTGGGACGGGATTCATTTGAAACGAGAAGGACGAGGTTGAACTCAACCAGCAGTTTGATGGTTGAATCTTCTATTGACAGTTCTCCTGAGACTCCTGGTAGAAGAATCAGTACATTGACAGAGCAGCTATCTGCTGTTGAAGAAGAGAACAAGACTCTAAAAGAATCCCTAAATAGGAAAATGAGTGAGCTACAATTCTCAAGAGTAATGCTTTCTCGCACAGCTTCAAAACTTTTGCAACTGGAGTCACAGATTGGAGATTCGCCTAGAAGCCACTTAAACTTAGAGAAGCCTCGAAGTAACCTAGCATTACATGAGTTCTCTTTGGCATCAATGTCTGACAATGGCAGCGATGACAAGGCTAGCTGTGCTGAATCTTGGGCTTCTGCCTTGATTTCAGAATTGGAAAACTTCAAAAGCAATAAGCAGAAGGAGTCACAGTCATACAGAAGTGTTGGAGCTTCAGACATAAATCTTATGGATGACTTCCTTGAAATGGAAAAATTAGCAATAGTCTCTGTTGAAAAAGCCCCTGAAATGTCTCATGCTTCCTCAAAAGGAGTTAATGAATTTAATGGTTTTTCAGATACTGGGATGGATGATTCTACCTTTGATGCATCAGGTAAGGAGATCGTTGGAGTGCCTGGTCGCATTTCTAACGTGTCAGTGTCTAATCAGGAAACCTCTTCCATTGATATTTTGAAAGGTAATGTTCCTGGATGGCTTCATGAGATAGTAAAATTGGTCTTGGAGCAGAGTTGCATCACTCATAAAACCCCTGATGATATATTTGAGGATGTTAGAGTAGCTTTGAGGCATCTGAATAATCCAGATCTACTTGTCTTTGATCCAACCAAAGGATCTGGTCTTATTGATCCATCTGGTGATGTAAATGATGCTGATATCTCATCAATAAAGATAGTGAAAGAACAGTCTGAGGCAGATCTGAGTAAATCGATAGGCAAGATAGTTGAGCTCATTGAAGGAATCAGTGTGCCTGCTGTGGATTATGATGGTTTGGATCCCTTGTGCGGAAGAGATGGGAATAATCTTTCACATAAGGTTCTAGGAATGCCAACAGGATACATGGTCCGTGTTTTCCAGTGGAAAACTTCAGAACTAGCTAACGTTTTGCAACATTTTCTCCATGTATGTTATGATTTACTGAATGGCAAGGCGGATCATGGAACATTTGCTGAGGAATTAACAACAGCTTTGGATTGGATTATGAATCACTGCTTTTCGATCCAGGATGTTTCTACTATGAGGGATGCCATCAAGAAACAATTTGATTGGGACGAGACCCGAAGTGAAAGTGAAGCAGAGGCAAGTCTTTTTACAGGGGCAGATAAGTTGCCTCAAGTAACTACTGCTGGTGGTGATGATCTACAAACTGGAGAGATGTATTATGCCGAGAAAGAAGAATTAAAAAATATTAAAGATAAATTGGTCAGTGCTGAATCTCAAAAGGGAGCCATGGAAGGGAGACTTAAATCAGCTACTGACAGGACTGAATCATTAATAAGTCAACTCCAAGAATCTGAGAAAACTATTACCAGCTTGACATCAGATTTACAAAGCTTAAAAGAATCAAATGCAGTACTTGAGGGTCAAATAAAAAATCTCAAATTGGCAAATTCAGATCTCGATGTACAGCATAAAGAAGCTGAATTGAAAGAGGCTTATCACAAGGTTTTCACATTAGAAGTGGAACTGGAGAACAAAACTCACTGTTGTGAAGACTTGGAGACCAGATGTCTTGAATTGCAGCTCCATCTTGAAAGCATGTCAAAGAACTGCTCAAACAATGCTATTGACCATAAAGATAAGCCACTGCGAACTGATTGGGAGATAACAGCTGCTTCAGAGAAGCTGGCCGAGTGTCAAGAAACCATTCTTAACCTTGGAAAGCAGTTGAAGGCGATAGCTGCACCAAAGGATGCGGCTCTTTTTGACAATGCCATTGCTAATGCAGTTACCAACACGGCACCAGCCACTACCTCGCATGTGGCTCCAAGTCCTGCCCTCGAGAAAGATACGAGAGTGAAAAATCGATCCCTGCTCGATCAAATGCTGGCCGAAGATGATAATAAGGCCAAGGTTTCGAAAGAAAGTGATGGCAAAACAACTCACTCCAACATTCCTGGCAACATAGAGACCCTGGAAAAGATTTTAGTTTTGAATGGAACTAAAGGCAATGACGATGAGGATGCTGTTAATTCTTTGGCCATTGTTCCTGCAAAGAAACAGGGCAGTGGAAGTTTGTGGAAGAAATTATGGAGAAAAAAGAAAAGTGCCAACAAGAAAGCACCACTTTCAACATCTAATATATGA 3198 0.4053 MDHKPWPWRKKSSEKITVTTDNTNLTSKENQEVQALLADKEELEKDLKRLNDKLTSALSDCNAKGELLKKQTKIAQEATAGYEQAKAEVLSMKHDFDEALQQRLIYEERVVHLDGALKECMQQLRFVREEQGRRVHDAVMKASKEFEKERMVLEEQLSEVGKWLAKAETENSHLNKSILAKENLIEDLKRQLNQAEANHNALMIRLDSIEKENASFKYEVRVLEKELEIRNEEREFNRRTADASHRQHLENVKKIAKLESECQRLRLLVRKRLPGPAALAKMKNEVEVLGRDSFETRRTRLNSTSSLMVESSIDSSPETPGRRISTLTEQLSAVEEENKTLKESLNRKMSELQFSRVMLSRTASKLLQLESQIGDSPRSHLNLEKPRSNLALHEFSLASMSDNGSDDKASCAESWASALISELENFKSNKQKESQSYRSVGASDINLMDDFLEMEKLAIVSVEKAPEMSHASSKGVNEFNGFSDTGMDDSTFDASGKEIVGVPGRISNVSVSNQETSSIDILKGNVPGWLHEIVKLVLEQSCITHKTPDDIFEDVRVALRHLNNPDLLVFDPTKGSGLIDPSGDVNDADISSIKIVKEQSEADLSKSIGKIVELIEGISVPAVDYDGLDPLCGRDGNNLSHKVLGMPTGYMVRVFQWKTSELANVLQHFLHVCYDLLNGKADHGTFAEELTTALDWIMNHCFSIQDVSTMRDAIKKQFDWDETRSESEAEASLFTGADKLPQVTTAGGDDLQTGEMYYAEKEELKNIKDKLVSAESQKGAMEGRLKSATDRTESLISQLQESEKTITSLTSDLQSLKESNAVLEGQIKNLKLANSDLDVQHKEAELKEAYHKVFTLEVELENKTHCCEDLETRCLELQLHLESMSKNCSNNAIDHKDKPLRTDWEITAASEKLAECQETILNLGKQLKAIAAPKDAALFDNAIANAVTNTAPATTSHVAPSPALEKDTRVKNRSLLDQMLAEDDNKAKVSKESDGKTTHSNIPGNIETLEKILVLNGTKGNDDEDAVNSLAIVPAKKQGSGSLWKKLWRKKKSANKKAPLSTSNI 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip01g00977 1065 MobiDBLite consensus disorder prediction 1043 1065 - -
Aip01g00977 1065 Coils Coil 324 351 - -
Aip01g00977 1065 SUPERFAMILY Tropomyosin 761 895 - -
Aip01g00977 1065 Coils Coil 171 226 - -
Aip01g00977 1065 Pfam Filament-like plant protein, long coiled-coil 64 937 IPR008587 -
Aip01g00977 1065 PANTHER FILAMENT-LIKE PLANT PROTEIN 1 1059 - -
Aip01g00977 1065 Coils Coil 82 102 - -
Aip01g00977 1065 Coils Coil 26 60 - -
Aip01g00977 1065 Coils Coil 757 847 - -
Aip01g00977 1065 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1059 - -
Aip01g00977 1065 MobiDBLite consensus disorder prediction 983 1003 - -
Aip01g00977 1065 Coils Coil 867 887 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip01g00977 Aip-Chr1 18931069 18937470 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip01g00977 - - aprc:113858788 1435.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00625 05 7728718 7733861 Aip01g00977 01 18931069 18937470 ECH
Aip01g00977 01 18931069 18937470 Aip01g00977 01 18931069 18937470 ECH
Aip05g00625 05 7728718 7733861 Aip01g00977 01 18931069 18937470 PCT