Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip04g03374 ATGGGAACCCCTCACTTTCTTGCAATACCATTTCAAGTTTCATCACACATTAATCCCCTTTTGCAACTCTCCAATGTTCTAGCAAAACATGGTTGCAAGGTCACTTTTCTTTACACTGAATTCAACCACAAAAGAGCAAAAAATTCTGCTGCTGCTCAAGATCATGATGATGATGAGGAATCATCAAAGATGATAAAGTTTGTGACATTCCCAGATGGTTTGGGCCCTGAAGGTGATAGAAGTGACAGCATGAAAGTGCTTCAATCTATCAAAAGAACAATGCCTTCTTTGCTTCCAAAGCTCATAGAAGATATCAATGCTTTGAATTTTGAGAACAAGATCACTTGTATTCTTGTCACATTTAATATGAGTTGGGCCTTGGAAGTTGGTCACCAATTGGGAATTAAATGTGCTGCTCTGTTTCCCTTCTCAGCTACAAGTGTGGCTTCAGTTCATTTCATCCCCAAGCTCATGGAGGATGGAATTATAGATTCAGATGGAAACTCCATCAAATCACAAGAAATTCAACTTGCTCCAAATATGGCAATGATGGACTCTAAACACTTTTTATGGTGTAACTTAGGCAATGACTTCTTCAAGCACCTTGTGCAAGAAACTAAAGCTATGGAGTTATTAGCAGAGTGGTGGCTTTGCAATAGTGCCTATGATCTTGAGTCAGGAGCATTCTCCATATCTCCAAAGCTCCTACCAATTGGACCATTGATGGAAAGTAACAGCAACAACAACAACAAAAGTTCCTCATTCTGGCAAGAAGACACAACATGCTTAGAATGGTTGGATCAACAACAACCTCAATCTGTTCTATATGTTTCATTTGGTACTTTAGCAGTAATGGAATCAAACCAATTCAAAGAATTAGCACTTGCACTTGATCTCATTGACAAGCCTTTTCTTTGGGTTATAAGACCAGATAATATGGATAACAAGAGAAACAACAAATACCCAGATGAATTTCATGGAAGAAAAGGTGTATATAGTGGTGTTCCTTTTCTGTGCTGGCCATTTTTCATTGACCAATTTTGGAATGAATCATATATTTGTGATATTTGGAAAGTTGGGTTGGGATTGAAAAAGGATGACAATGGATTCATATCAAAGGAAGAGATAAGTAAGAAGGTGTTGCAATTGCTTGGTGACGAAGGCATAAGAGAAAGATCTTTGAAATTGAAAGAAGTGAGTAGGAACAACCTAGCTGAAGGTGGCCAATCTACAAAGAATCTTGAAAATTTTGTCCATTGGGCAAAATAA 1269 0.3783 MGTPHFLAIPFQVSSHINPLLQLSNVLAKHGCKVTFLYTEFNHKRAKNSAAAQDHDDDEESSKMIKFVTFPDGLGPEGDRSDSMKVLQSIKRTMPSLLPKLIEDINALNFENKITCILVTFNMSWALEVGHQLGIKCAALFPFSATSVASVHFIPKLMEDGIIDSDGNSIKSQEIQLAPNMAMMDSKHFLWCNLGNDFFKHLVQETKAMELLAEWWLCNSAYDLESGAFSISPKLLPIGPLMESNSNNNNKSSSFWQEDTTCLEWLDQQQPQSVLYVSFGTLAVMESNQFKELALALDLIDKPFLWVIRPDNMDNKRNNKYPDEFHGRKGVYSGVPFLCWPFFIDQFWNESYICDIWKVGLGLKKDDNGFISKEEISKKVLQLLGDEGIRERSLKLKEVSRNNLAEGGQSTKNLENFVHWAK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip04g03374 422 CDD GT1_Gtf-like 4 403 IPR002213 GO:0008194
Aip04g03374 422 Gene3D Glycogen Phosphorylase B; 330 402 - -
Aip04g03374 422 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 420 - -
Aip04g03374 422 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 329 422 - -
Aip04g03374 422 Gene3D Glycogen Phosphorylase B; 403 414 - -
Aip04g03374 422 PANTHER EG:EG0003.4 PROTEIN-RELATED 329 422 - -
Aip04g03374 422 PANTHER UDP-GLUCOSYLTRANSFERASE FAMILY PROTEIN 1 330 - -
Aip04g03374 422 Gene3D Glycogen Phosphorylase B; 2 262 - -
Aip04g03374 422 PANTHER EG:EG0003.4 PROTEIN-RELATED 1 330 - -
Aip04g03374 422 Gene3D Glycogen Phosphorylase B; 263 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip04g03374 Aip-Chr4 128132121 128134286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip04g03374 1 422 Glycosyltransferase AT3G02100 36.623 4.06e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip04g03374 - - gmx:100800937 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03079 10 127922763 127925143 Aip04g03374 04 128132121 128134286 PCT
Aip04g03374 04 128132121 128134286 Aip10g03100 10 128261282 128327482 PCT