Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03100 ATGAGTCTTCCAACTGTGCTAGTATTACCATTACCAGCTCAAGGACATGTCAACCCAATGATGATCTTGTCTCAAAGATTGGCTGAAAATGGTTGCAATATCATCTTTGTCAACACTGAATTCATCCATAAGAAAGTGCTGAGTTCCATGGGGAATCAAGAAGGCCGCGGTGTTAACGGAGAATCGCGGATAAAGTTGGTGTCAATCCCAGATGGATTAGGACCTGATGCAGACAGAAATAATTTGTGGGAAGTATCTGATTCTATAAAGAAGAACATGCCAGCTATGCTTGAGAAGCTAATTGAAGATCTTAGATTGAAAGATGGTATCATAGTAAGCTGCGTAGTTGCTGACTCAGCTATGGCAGGAGCGTTGAAAATTGCAAGCAAGATTGGAATCAAAGGAGTTGTGTTCTATCCTGCATCAGCAGCTATGTTAGCCTTGCAGTGTAGCATACCAAAGCTTATTGAGGATGGGATCATAGACTCTAATGGGTTGGCAACCACACAAAAAAGATTTCAGTTATCACCAAGGATTCCTCCCATGGACACAGAATTTATATGGTGGGCAAAAATATCTGACTCTAAAACTGAGAAGATGTTATTCAACATTATTCTTCAATCCATGAAAACTCTAGAATCCACAGAGTGGTGCTTTTGTAACTCCACACCCGATCTTGAACCTGGAGCATTATCATTTGTACCAAAGCTATTACCAATTGGTTCATTATTAAGAACCTATGACGATGATCAAGGTGTAACTGAAAGATCATTGGGACAATTCTGGGAAGAAGATTTTTCTTGTTTGAATTGGCTTGATCAACAACCTCATGGTTCTGTTATATATGTTGCATTCGGAAGCACCACTCTTTTTGATGAAAAACAATTCAAAGAACTCGCTCTCGGACTTGAACTTACTAATAGACCCTTTCTTTGGGTGGTGCGAAAAGATTCAGATTGTAGCAATAAAGTGTGTTTTCCTAACGAATTCAAGGGGAATGAAGGTAAGATAATTGAATGGGCTCCTCAAGAAAAGGTGCTACGCCACCCTGCCATTGCTTGCTTTATAAGTCACTGCGGTTGGAATTCGACTTTGGAAGGTTTGTCTAATGGAGTGCCTTTTTTGTGTTGGCCATATTTTGCTGACCAATTCTTTGACAAAATATATATTTGTGATGAGTGGAAGGTTGGATTGGGATTTGATTTGGATGAGAATGGGATGATCTCACGCGAAGAGATAAAAGTCAAAGTTGATAAATTGCTTAGTGATGAGAACATAAGATTTAAGGCTCGTGAGCTAAAGAAGAAGCTAATGAAGGACGTTGATGTTGGAGGAAGGTCTTCAGAGAACTTAAACAAGTTCATCAACTGGTTGAAGGAATAA 1383 0.3948 MSLPTVLVLPLPAQGHVNPMMILSQRLAENGCNIIFVNTEFIHKKVLSSMGNQEGRGVNGESRIKLVSIPDGLGPDADRNNLWEVSDSIKKNMPAMLEKLIEDLRLKDGIIVSCVVADSAMAGALKIASKIGIKGVVFYPASAAMLALQCSIPKLIEDGIIDSNGLATTQKRFQLSPRIPPMDTEFIWWAKISDSKTEKMLFNIILQSMKTLESTEWCFCNSTPDLEPGALSFVPKLLPIGSLLRTYDDDQGVTERSLGQFWEEDFSCLNWLDQQPHGSVIYVAFGSTTLFDEKQFKELALGLELTNRPFLWVVRKDSDCSNKVCFPNEFKGNEGKIIEWAPQEKVLRHPAIACFISHCGWNSTLEGLSNGVPFLCWPYFADQFFDKIYICDEWKVGLGFDLDENGMISREEIKVKVDKLLSDENIRFKARELKKKLMKDVDVGGRSSENLNKFINWLKE 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03100 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 266 424 IPR002213 GO:0008194
Aip10g03100 460 Gene3D Glycogen Phosphorylase B; 256 439 - -
Aip10g03100 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 460 - -
Aip10g03100 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 3 460 - -
Aip10g03100 460 CDD GT1_Gtf-like 6 455 IPR002213 GO:0008194
Aip10g03100 460 ProSitePatterns EF-hand calcium-binding domain. 401 413 IPR018247 -
Aip10g03100 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 459 - -
Aip10g03100 460 Gene3D Glycogen Phosphorylase B; 8 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03100 Aip-Chr10 128261282 128327482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03100 1 459 Glycosyltransferase AT3G02100 45.140 4.30e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03100 - - ahf:112716494 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03100 10 128261282 128327482 Aip10g03100 10 128261282 128327482 ECH
Aip04g03374 04 128132121 128134286 Aip10g03100 10 128261282 128327482 PCT