Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03079 ATGGCAAGGCCTCATGTTCTTGTTGTACCTTACCCTGAACAAGGGCATGTGATTCCACTAATGGAACTTTCCTTGTGCTTAGTAAAACAAGGCATCAAGGTAACATTTGTTAACACTAAACATAACCATGAGAGGATCATGAATGCATTCCCAAAAGGGAATAATAATGCTTTGCTATCTCAAATGAATCTTGTGTGGATACCTGATGGATTAGGATCCTCAGAAGAGAGGAAGATGCCGGGGAAGTCGTCCGAAGCGGTGCTGAAGGTTATGCCGGAGAAAGTTGAGCAGATCATTGAAGACATCAATGATGGATCACTTTGTGAAGAAAAGATTAGTTGTGTGCTTGCTGATCAGAGCATTGGCTGGGCTATTGGCATTGCCGTAAAGAAGGGGATTCGACCGGTGGCGTTCTGTCCTGCCGCCGCCGCGCAGTTGGTGTTGGGATTGAGCATCCCAAAGTTGATTGAGAGTGGCTTCATCGACCAAGATGGAACTCCACTGGAAAATCAAATCATTCAGCTATCACCAACAATGCCAGTTGTAAGCACAGAAAACCTTGTCTGGGTTCGCGCAGGGAGCACAGCTGCTCAGAAGCATATTTTCCAGCTCATGTTGAAAAACATTGAGTTTATGGAGAAAACTGAATGGATTCTTTGCAATTCAACTTATGATCTTGAGTCTGCAGCATTTTCTCTGGCTCCAAAAATCACACCAATAGGGCCAATTCTGTCATCAAGCCATAACGAACTTGACCACTCTGCAGGTCATTTCTGGCCACAAGACCAGAATTGTTTGAAATGGTTGGATCAACAATCACCCTGTTCAGTTATATATGTCGCATTCGGAAGCATCACAACTTTTAGTTCACTACAATTCCAAGATCTCTGTTTGGGACTCGAAACGTCAAATAGGCCTTTCCTGTGGGTTCTGCATCCGGATATCAAAGGAGGGATGCAAAATCTGTATCCAGAAGGGTTTGAAGAAAGGGTAAGTAACCGTGCTAGGATGGTGGGTTGGGCGCCACAGCAGAAAATTCTAAGTCATTCTTCGGTTGCTTGCTTCATAAGTCACTGTGGTTGGAACTCTACAATGGAAAGTGTAAGCAATGAAGTCCCAATCTTATGTTGGCCTCACTTTGCTGATCAGTTCTTGAATAGGAGCTATGTTTGTGATGTTTGGAAGGTAGGAATTGCACTCGAACGAGACGAAAGTGACATAGTCACAAAAGGGGAAATCAGAGACAAAATTGAGCAGCTTTTGAGTGATGAACATTTGAAAGCAAGAGCTGCAAGTATCAAGGACAAGGTTCAACTTGCCACTGAACAAGGTGGCTTGTCTAACAGTAATCTAAATAGATTTATCAAGTGGATCAAAACATGA 1383 0.4338 MARPHVLVVPYPEQGHVIPLMELSLCLVKQGIKVTFVNTKHNHERIMNAFPKGNNNALLSQMNLVWIPDGLGSSEERKMPGKSSEAVLKVMPEKVEQIIEDINDGSLCEEKISCVLADQSIGWAIGIAVKKGIRPVAFCPAAAAQLVLGLSIPKLIESGFIDQDGTPLENQIIQLSPTMPVVSTENLVWVRAGSTAAQKHIFQLMLKNIEFMEKTEWILCNSTYDLESAAFSLAPKITPIGPILSSSHNELDHSAGHFWPQDQNCLKWLDQQSPCSVIYVAFGSITTFSSLQFQDLCLGLETSNRPFLWVLHPDIKGGMQNLYPEGFEERVSNRARMVGWAPQQKILSHSSVACFISHCGWNSTMESVSNEVPILCWPHFADQFLNRSYVCDVWKVGIALERDESDIVTKGEIRDKIEQLLSDEHLKARAASIKDKVQLATEQGGLSNSNLNRFIKWIKT 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03079 460 CDD GT1_Gtf-like 4 440 IPR002213 GO:0008194
Aip10g03079 460 Gene3D Glycogen Phosphorylase B; 253 439 - -
Aip10g03079 460 PANTHER EG:EG0003.4 PROTEIN-RELATED 3 460 - -
Aip10g03079 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 459 - -
Aip10g03079 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 428 IPR002213 GO:0008194
Aip10g03079 460 PANTHER UDP-GLYCOSYLTRANSFERASE 83A1 3 460 - -
Aip10g03079 460 Gene3D Glycogen Phosphorylase B; 8 451 - -
Aip10g03079 460 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03079 Aip-Chr10 127922763 127925143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03079 1 460 Glycosyltransferase AT3G02100 50.216 1.71e-164 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip10g03079 - - adu:107471118 919.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03079 10 127922763 127925143 Aip10g03079 10 127922763 127925143 ECH
Aip10g03079 10 127922763 127925143 Aip04g03374 04 128132121 128134286 PCT