Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip02g01776 ATGAGCTTTCATATGTTATTTTCTGGCATAAGGAACGCCTTTAGGAAGGATGAACTAGGCCTGGAAATAATGCATATATCACTGCCTACCACTCTTGCTTTGGCTGCAGATCCTATTGCTTCTCTGATTGATACTGCATTCATCGGACACATAGGCCCTGTGGAGCTTGCTGCAGTGGGGGTATCAATTGCAATTTTTAATCAAATCTCAAAAATAGCAATAATTCCTCTGGTCAGTGTTACAACCTCGTTGGTTGCCGAGGAAGATGCCGTCGAGAAATTACAAAATCAACCATCAGAAACAGAAATGCTGATCCATGCCTCTTCTGTGACTGAGGAAACAAAATTGGAAGTGGAACAAATAGATCCTGAGTGCAGTACATCATCAAGAAATGTTAATAGAGTAGCTAAACTTGGCCATGACAAAAGCTATATTCCATCAGCTTCATCAGCAATAGTTATTGGAGCTGTTCTCGGCATCTTACAAGCTCTCTTTCTCATTTTTACAGCCAGACCAATCTTGAATTACATGGGAGTCGATTATAATTCTCCAATGTTGAAGCCGGCACAGCAATACTTGACTCTGAGGTCATTTGGTGCACCAGCTGTGATACTTTCTATGGCCATGCAAGGAGTTTTTCGAGGAATCAAAGATACGAAAACACCTTTATACGCCACAATTGTGGGAGATGTAACAAATATCATTTTAGATCCATTGCTTATCTTCGTACTCCGGTTGGGAGTCAGCGGTGCAGCAATCGCACACATTATCTCCCAGTACTTGATTTCCTTGGTGTTGTTGTGGAGTTTAATGAAGCAAGTTGATCTAATGCCTCCAAGTATCCAAGATTTTCAATTTGGGAAGATTCTAAAAAATGGGTTTCTGCTATTGTTGAAAGTTACAGCAGTGACATTCTGTGTGACACTGTCAGCATCCCTTGCAGCAAGACAAGGATCAATAACCATGGCTGCCTTCCAAATCTGCTTACAGATTTGGATGGCCACCTCTTTGCTTGCTGATGGATTAGCTGTTTCTGCTCAAGCCATTCTTGCAAGTGCGTTTGCGCAAAGGGATTACCATAAAGTGATCACATCGGCTTCCCGTGTTCTTCAGCTTGGGCTGATTCTGGGGCTGGTTCTCTCATTCCTTCTCTTTAGTCTGCTCCCTTTTGCTTCTAAGTTATTTACAAACGACGTCGCTGTTCTGCATCTTATTGGTATTGGTATTCCGTATGTTGCAGCCACTCAACCCCTCAATTCACTAGCATTTGTTTTTGACGGAGTAAACTACGGAGCTTCGGATTTCATATACTCTGCTTACTCAATGATTTTGGTGGCATTGGTGAGCATATTTAGCTTATATATGTTATCCTCAAGCTATGGCTTTAGTGGTATCTGGATTGCTTTGTCTATTTACATGAGCCTCAGGACATTTGCTGGCTTTTGGAGGATAGGTACTAGATCAGGACCTTGGCACTTCCTGAAGGAAAACTATGCACTACTACAATAG 1509 0.4195 MSFHMLFSGIRNAFRKDELGLEIMHISLPTTLALAADPIASLIDTAFIGHIGPVELAAVGVSIAIFNQISKIAIIPLVSVTTSLVAEEDAVEKLQNQPSETEMLIHASSVTEETKLEVEQIDPECSTSSRNVNRVAKLGHDKSYIPSASSAIVIGAVLGILQALFLIFTARPILNYMGVDYNSPMLKPAQQYLTLRSFGAPAVILSMAMQGVFRGIKDTKTPLYATIVGDVTNIILDPLLIFVLRLGVSGAAIAHIISQYLISLVLLWSLMKQVDLMPPSIQDFQFGKILKNGFLLLLKVTAVTFCVTLSASLAARQGSITMAAFQICLQIWMATSLLADGLAVSAQAILASAFAQRDYHKVITSASRVLQLGLILGLVLSFLLFSLLPFASKLFTNDVAVLHLIGIGIPYVAATQPLNSLAFVFDGVNYGASDFIYSAYSMILVALVSIFSLYMLSSSYGFSGIWIALSIYMSLRTFAGFWRIGTRSGPWHFLKENYALLQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip02g01776 502 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 4 495 IPR044644 -
Aip02g01776 502 PANTHER PROTEIN DETOXIFICATION 4 495 - -
Aip02g01776 502 TIGRFAM matE: MATE efflux family protein 29 466 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip02g01776 502 CDD MATE_DinF_like 22 486 IPR044644 -
Aip02g01776 502 Pfam MatE 298 454 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aip02g01776 502 Pfam MatE 148 239 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip02g01776 Aip-Chr2 77323264 77330854 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip02g01776 K03327 - gmx:100810327 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip02g01776 02 77323264 77330854 Aip02g01776 02 77323264 77330854 ECH
Aip02g01776 02 77323264 77330854 Aip08g00375 08 2892911 2897431 ECH
Aip02g01776 02 77323264 77330854 Aip03g00567 03 5501716 5505359 ECH